| Annotation |
|---|
| Description | jgi|Araly1|938240|scaffold_502431.1 |
| Sequence |
TTTTAACTAC TCGGATCTTT ATGGGCGTTG AGATGTTGAA ACTGAAACTG ATGCCTAGCT CATTCCGTCG GCGCGTGATC TTACGCGCCC TCGTGATCGT TTGCGCTTTC TCTGTTGTAT CTGTTTTGCG AAACCTCGGC GGAGCTTATG AAGGAGAGAA TAGTAATAAC ACTCAGCCAT GTAAGGTTGA TGAATGCGCC GTGAATTTCG CGTTTCTGGG TCCGTTCCTC TTCTCAGGCA ACGGATTATT ATCCAACAGG TTCTTGAAAC CTGTTTTGAA CTATTTGGAG TCGGAGAAAT GTAAGGAAAA CATTTATTTG ACTACTGAAG TTGTCAGAGA GCTTACTGGT ATGAATCTGC TGAGTAATGA TTCGAATGCT CTCTGTATTG GTCGGAGATC GGTTTCAGCT GTTCTTGCAA TGAATCGACA AGGGATCTCT GATGTTAGTG TGGCTTATAT GCCACCGGTT TTCGCTTTCA AGCATAGGAA GTTCACAAGT GAGCTACATT ATGAGGATGC TTCTTTTGGC TTTGTGTTTT CTATGGATCT TGAGACAGTT GCTGTCCCTG CTTCACTTGT TTATGAGATT GAGCGTATAC TTAAGCCTGG TGGAACCGGG GCTATGCTTG TGGGTACTAT TAGTGGGTCT GACTCTAACG AGTTGGTCAG ATCGGTTTCG CCTGTTTCTT CATTGCTGAA GAACTCGAGT GTGGTTCATG TTGCTTCCTT GGGTGAACAG GTTTTGGTTG TGTTCAAGAA AGATGGAGAA GATAGTTTCC GCTTGGATCA AACTCATCAT GACCTTCCGG CTGATTGCTC GTCCGTTCTC AACAACCTAC CATACATTGG ATTATTGGAG CCTCTTCTGG AGGAAAAACG TTCGGATTTC GAGAGACGGA TTCATTACTT GCCCGAGTTC ATTGATCTCT CTTCTCGGAA GCGGCTGGTT TATATTGATA TCGGGGCAGC GGATCATGTG AAAGCGAGGT CGAACTGGTT CTTCCCATCG TACCCAATCG ACAGGAAAGC TTTTAATAGC TACTTTGTGC ATCACAACAC ATCTATCTTG ACTTCTTATG TCAAAAGCCC TGGCGTAACC TTCATCTATC ATCCAGGACT CGCAGCAACT AAAACTACAA TAGCCAGTCT TGGAGATCAA GAAGAACCTT TTGTGGAAGA TGATAGCTTT GATTTTCTAG CATGGTTCAA GGAAACAGCG AGCTTCGCTG ATTTTGTTGT TCTGAAGATG AACACAAGCA ATACTGAGCT GAAGTTTCTC TCAGAGCTGA TAAAGACAGG AGTGATCTGC TCAGTTGATG AACTGTTTCT TCACTGCACA GGCTACAGAG ACTGCACTGG TATCTTTAAA AGCCTCAGAA ACAGTGGCGT CTTTGTCCAT CAGTGGTGGG AAGACTAATA ATAAGCTCAA GAAATGGA |
| Length | 1438 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 15660957.. 15662388 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G53402.1 |
| Description | conserved peptide upstream open reading frame 46 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF46 represents a conserved upstream opening reading frame relative to major ORF AT3G53400.1 |
| Alias | [CPuORF46][conserved peptide upstream open reading frame 46] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg487089 | conserved peptide upstream open reading frame 47 |
| 2.23607 |
Ahg923735 | aldehyde dehydrogenase 22A1 |
| 3.4641 |
Ahg472246 | Subtilisin-like serine endopeptidase family protein |
| 11.1355 |
Ahg479029 | phospholipase D alpha 1 |
| 27.4955 |
Ahg471997 | white-brown complex homolog protein 11 |
| 29.4958 |
Ahg919631 | copper/zinc superoxide dismutase 1 |
| 33.9411 |
Ahg950808 | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase |
| 37.8153 |
Ahg940842 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 42.332 |
Ahg913518 | acetyl-CoA carboxylase 1 |
| 43.3128 |
Ahg935146 | phosphoenolpyruvate carboxylase 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|