| Annotation |
|---|
| Description | jgi|Araly1|938351|scaffold_502542.1 |
| Sequence |
AGAGGCTTCA CGAGTTCAAT AATGAGTCAG AAGGGTTTGA TATATAGCTT TGTTGCTAAA GGAACAGTTG TTCTTGCGGA GCATACTCCT TATTCAGGAA ACTTTAGCAC CATTGCTGTT CAATGTCTGC AGAAGCTACC CACTATTAGC AGCAAGTATA CTTACTCTTG CGATGGTCAT ACTTTCAATT TCCTTGTTGA CAATGGTTTT GTGTTTCTTG TGGTTGCTGA TGAGTCCACT GGAAGAAGTG TTCCTTTCGT GTTTCTTGAA CGGGTCAAGG AAGACTTTAA GAAGCGGTAT GAAGCGAGTA TAAAGAATGA TGAGCGACAC CCTCTTGCAG ATGAGGACGA AGATGATGAT TTGTTTGGAG ATCAGTTTAG CATTGCATAC AATCTTGACA GGGAGTTTGG GCCCATACTT AAGGAGCATA TGCAGTATTG TATGAGCCAT CCAGAAGAGA TGAGCAAACT TTCAAAGTTG AAGGCCCAAA TAACTGAGGT CAAGGGGATC ATGATGGACA ACATTGAGAA GGTTCTGGAC AGAGGAGAGA AGATCGAACT TCTGGTTGAC AAAACCGAGA ACCTACAGTT CCAGGCAGAT AGCTTCCAGA GACAAGGAAG GCAGTTAAGA AGGAAGATGT GGCTACAGAG TCTGCAGATG AAGCTGATGG TGGCTGGTGC TGTTCTCTCC TTTATTCTCA TCGTTTGGGT TGTTGCTTGT GGAGGTTTCA AATGCTCATC ATGATGTTTC GCTTCGTTTG TATCTGT |
| Length | 767 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16023440.. 16025238 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G54300.1 |
| Description | vesicle-associated membrane protein 727 |
| TAIR curator summary | Encodes a member of Synaptobrevin -like protein family. VAMP727 is a R-SNARE and interacts with SYP22/VTI11/SYP51. It is required for trafficking of storage proteins to the protein storage vacuoles (PSV) and also for PSV organization and biogenesis. Loss of function mutations have no phenotype but double mutants with SYP22 are embryo lethal. |
| Alias | [ATVAMP727][VAMP727][VAMP727][vesicle-associated membrane protein 727] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 18.1659 |
Ahg482511 | similar to RCD one 1 |
| 19.6214 |
Ahg470975 | nuclear factor Y, subunit C9 |
| 19.7484 |
Ahg487613 | Plant calmodulin-binding protein-related |
| 25.9808 |
Ahg494019 | AIG2-like (avirulence induced gene) family protein |
| 30.3974 |
Ahg473000 | dihydrosphingosine phosphate lyase |
| 32.7261 |
Ahg487925 | transducin family protein / WD-40 repeat family protein |
| 35.327 |
Ahg314063 | |
| 35.7911 |
Ahg909961 | |
| 36.4966 |
Ahg487401 | DHFS-FPGS homolog B |
| 36.8511 |
Ahg918566 | RADIATION SENSITIVE 17 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|