Detail



ID : Ahg938451

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938451|scaffold_502642.1
Sequence
GGGATGCTCT GAGAATTTTC ATGATTGATC GTCTTGGTGA AACGTTCAAC GAAACAGTGG TCCCTCTGAG GTACACGCCT AGAAAGTTTG TTCTCCAACC CAAGCGGAAG TTGTTGGTTA TTATCGAGAG TGACCAGGGA GCATTCACCG CAGAAGAGCG TGAAGCTGCA AGAAAGGAGT GCTTCGAGGC TGGTGGAGTG GGAGAAAATG GCAATGGCAA TGCAGATCAG ATGGAGAATG GTGCGGATGA TGAAGATAAG GAAGACCCGC TTTCTGATGA GCAGTACGGT TATCCAAAAG CAGAGTCTGA AAAGTGGGTT TCTTGCATCA GAATTCTTGA TCCCAAGACA GCTACGACAA CTTGTCTCCT GGAACTTCAA GACAACGAAG CTGCATACAG TGTCTGTACG GTGAATTTCC ATGATAAAGA GTATGGTACA TTGTTGGCTG TTGGTACAGT CAAAGGGATG CAGTTCTGGC CCAAAAAGAA TCTAGTGGCT GGGTTCATAC ATATTTATAG GTTTGTGGAG GAAGGGAAAT CTCTTGAGCT TCTTCATAAG ACGCAAGTAG AAGGTGTTCC TCTTGCTCTG TGCCAGTTCC AAGGAAGACT GCTGGCAGGG ATCGGACCTG TCCTCAGATT GTATGATTTG GGGAAAAAGA GACTGCTTAG GAAATGTGAA AACAAGCTCT TTCCAAACAC CATTATCTCT ATCCAAACTT ACCGTGACCG TATATACGTT GGTGACATTC AGGAGTCTTT CCATTACTGC AAGTACAGGC GCGACGAGAA TCAGCTATAC ATATTTGCGG ATGACTGCGT GCCGAGGTGG CTGACAGCAT CGCACCATGT GGATTTCGAT ACCATGGCAG GTGCAGATAA GTTTGGGAAT GTGTATTTTG TGCGGTTGCC TCAGGATCTG TCTGAGGAGA TAGAAGAAGA CCCGACAGGC GGGAAGATAA AGTGGGAGCA AGGAAAGCTG AATGGAGCAC CGAACAAAGT GGATGAGATA GTACAGTTCC ATGTTGGGGA CGTAGTGACG TGCTTGCAGA AAGCTTCGAT GATCCCAGGT GGATCGGAAT CCATAATGTA TGGAACAGTG ATGGGTAGCA TAGGGGCATT ACATGCTTTC ACATCGCGTG ATGATGTGGA TTTCTTCTCT CATCTGGAGA TGCACATGAG GCAGGAGTAT CCTCCTCTCT GCGGGAGAGA CCACATGGCT TACAGATCTG CATATTTTCC GGTCAAGGAC GTGATAGATG GAGATCTGTG TGAGCAGTTC CCGACACTCC CAATGGACTT GCAGAGGAAA ATAGCAGACG AGTTGGATCG AACACCTGCG GAGATTCTGA AGAAGCTCGA AGACGCAAGG AATAAGATCA TTTGATAAAC ACAAAACAAA AGAGA 
Length1405
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16412411.. 16413999
Download Sequence
A.thaliana
AGI-codeAT3G55200.1
DescriptionCleavage and polyadenylation specificity factor (CPSF) A subunit protein
TAIR curator summary
Alias[AtSAP130a][SAP130a][Arabidopsis thaliana spliceosome-associated protein 130 a][spliceosome-associated protein 130 a]
Gene coexpression
MR
MR Locus Description
51.8556 Ahg930609 Ribosomal protein L13 family protein
63.9531 Ahg473244 Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6
79.5236 Ahg947029 S-adenosyl-L-homocysteine hydrolase
83.4745 Ahg494606 GroES-like zinc-binding dehydrogenase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression