| Annotation |
|---|
| Description | jgi|Araly1|938484|scaffold_502675.1 |
| Sequence |
AATCACAAAT ATTCACCAAA ATGGCAATCA ATCAAATGAT TCTCTTAACC ATATTCCCAC TCTTTCTCCT CTTGAGCTTC ACCGACGCCG GAATCCCTGG CGTCTACTCA GGCGGCTCTT GGCAAACCGC TCACGCCACT TTCTATGGTG GCAACGATGC TTCCGGAACA ATGGGTGGCG CGTGTGGATA CGGGAATCTG TACAGTCAAG GATACGGAAC AAACACGGCG GCCCTGAGCA CAGCGTTGTT CAACAGTGGC CAAAGCTGCG GCGCATGCTT TGAAATCAAA TGTGTTAATG ATCCTAAATG GTGTCACCCG GGTAATCCTT CTGTCTTCGT AACCGCAACC AACTTTTGCC CTCCAAACTT AGCCCAACCT AGCGACAATG GCGGATGGTG CAACCCGCCA CGCTCTCATT TCGACCTCGC CATGCCCGTT TTCCTCAAGA TCGCTGAGTA TCGTGCCGGC ATTGTTCCCA TATCTTACCG CAGGGTGGCA TGTAGGAAGA GTGGAGGGAT AAGGTTCACG ATCAACGGTC ACCGTTACTT CAACTTGGTG CTGATAACGA ATGTGGCCGG AGCAGGAGAT ATCCTGAGGA CGAGCGTGAA AGGTTCAAAG ACTGGTTGGA TGAGTTTAAC TAGGAACTGG GGACAGAACT GGCAGTCTAA TGCTGTTCTC GTTGGTCAGT CACTTTCCTT CCGTGTCACA GCCAGTGACC GTAGAACCTC TACTTCATGG AACATCGCTC CTTCGAACTG GCAGTTTGGA CAAACCTTTG TCGGAAAGAA TTTCAGGGTC TAAAGTGAAA ATGAGGATAT CGA |
| Length | 823 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16534928.. 16536050 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G55500.1 |
| Description | expansin A16 |
| TAIR curator summary | expansin-like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. |
| Alias | [ATEXP16][ATEXPA16][ATHEXP ALPHA 1.7][EXP16][EXPA16][expansin A16][EXPANSIN 16] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.77496 |
Ahg912183 | Plant invertase/pectin methylesterase inhibitor superfamily |
| 11.5758 |
Ahg475599 | photosystem II reaction center protein G |
| 14.3178 |
Ahg479964 | heat shock transcription factor C1 |
| 15.3623 |
Ahg338119 | Disease resistance protein (CC-NBS-LRR class) family |
| 15.8745 |
Ahg933572 | NAD(P)-binding Rossmann-fold superfamily protein |
| 19.4165 |
Ahg925208 | binding |
| 20.3961 |
Ahg318716 | Glycosyl hydrolase family protein |
| 31.241 |
Ahg895646 | |
| 32.6343 |
Ahg930532 | alpha/beta-Hydrolases superfamily protein |
| 33.4066 |
Ahg907877 | NADH dehydrogenase subunit J |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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