Detail



ID : Ahg475599

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475599|fgenesh2_kg.2__729__ATCG00430.1
Sequence
ATGGCTCCTT CTTTAGTGCG ATTATATGAA CAAATGCCTG AACCAAAGTA TGTTATTGCT ATGGGAGCGT GTACAATTAC GGGGGGGATG TTCAGTACCG ATTCTTATAG TACTGTTCGA GGAGTTGATA AGCTAATTCC TGTAGATGTC TATTTGCCGG GTTGTCCACC TAAACCAGAG GCTGTTATAG ACGCTATAAC AAAGCTTCGT AAGAAAATAG CTAGAGAAAT CTATAAGGAT CGAATTAGAC CTCAACAGGG TAATCGGTGT TTTACTACCA ATCACAAGTT TTTTGTTGTA CGCAGTCCGC ATATTGGAAA TTATGATCAA GAATTACTCT ATCCACCATC ATCTACTTCA GAGATCTCTA CTGAAAAATT TTTTAAATAC AAAAGTCCAG TATCGTCCCA CGAATTAGTG AATTAG 
Length426
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8212179.. 8212604
Download Sequence
A.thaliana
AGI-codeATCG00430.1
Descriptionphotosystem II reaction center protein G
TAIR curator summaryEncodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase.
Alias[PSBG][photosystem II reaction center protein G]
Gene coexpression
MR
MR Locus Description
3 Ahg925539 NADH dehydrogenase subunit J
4.69042 Ahg907877 NADH dehydrogenase subunit J
8.66025 Ahg474072 unknown seed protein like 1
9 Ahg475572 photosystem II reaction center protein C
9.48683 Ahg470343 Cystatin/monellin superfamily protein
10.0995 Ahg475553 ribosomal protein S11
11.5758 Ahg938484 expansin A16
15.4919 Ahg942164 Protein of unknown function (DUF1677)
15.8745 Ahg925208 binding
16.4924 Ahg933864 beta glucosidase 33
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression