Detail



ID : Ahg938592

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938592|scaffold_502783.1
Sequence
CGGAGAAGAG GATCGTGTAA AGATGTATAC AGCTCTGATT TTTTCAGTCT TGTTGGTGTC GGTGGTGGCT CCGGTGAGAT CTCTAGACCC GCCTTTAAAC GACGACGTTT TGGGGCTCAT TGTATTCAAA GCCGATTTGC GAGATCCAGA GCAAAAGCTA GCTTCTTGGA ACGAAGATGA CTACACTCCT TGTAGCTGGA ATGGAGTCAA ATGCCATCCG AGAACCAATC GAGTCACTGA GTTAAACCTA GATGGCTTCT CTCTCTCTGG TCGAATTGGT CGTGGGTTAC TTCAGCTCCA GTTTCTTCAT AAGCTCTCTT TGTCAAACAA CAATCTCACG GGAATCATTA ACCCTAATTT GCTGCTGACC CTTGTTAACC TTAAAGTTGT CGACTTGAGT AGCAATGGCT TGTCTGGTTC GCTTCCTGAT GGTTTTTTCA GGCAATGTGG GTCATTAAGA GTTCTGTCTC TGGCCAAGAA CAAGCTAACG GGGAAGATTC CGGTTAGTAT AAGCTCGTGT TCGTCTCTTG CTGCTTTAAA CTTGTCCTCG AATAGTTTTT CTGGTTCTAT GCCTTTGGGG ATTTGGTCTT TGAACACTCT AAGATCACTT GATTTGTCAA GAAATGAGTT AGAGGGGGAG TTTCCAGAGA AGATAGACAG ATTGAACAAC TTGCGTTCGC TTGATTTGAG TAGAAACCGG TTATCCGGTA CTATTCCTAG CGAAATCGGG AGCTGTATGC TGCTGAAGAC TATTGATCTT AGTGAAAACT CTCTATCAGG AAGCGTACCA GATACATTTC AGCAGCTCAG TTTGTGTTAT TCTCTGAACT TGGGAAAGAA TGTGTTAGAA GGTGAAGTTC CAAAGTGGAT TGGAGAAATG AGAAGTCTTG AGTATTTGGA TCTTTCCATG AATAAGTTTT CAGGGCAGGT TCCAGACTCC ATAGGCAACC TTTTAGCACT GAAAGTTCTG AACTTTTCTG GGAATGGGCT TATTGGTAGC TTGCCGGACT CAACAGCCAA CTGTATCAAT CTCTTGGCTT TAGATTTTAG TGGGAACTCA CTAACTGGAA ATCTTCCCAT GTGGATATTT CAAGATGATT CTCGTGATGT TTCTGCATTT AAGAGTGATA ATTCCACTGG AGGTATCAAA AAGATCCAGG TGTTGGATCT CTCCCACAAT TCCTTCTCTG GCGAGATTGG AGCTGGTCTA GGAGATCTTA GAGACTTGGA GGGTTTGCAT CTGTCCAGAA ACTCTCTTAC CGGCCCCATC CCCAGTACCA TTGGGGAACT AAAGCACTTG GGCGTCCTTG ATTTGAGTCA CAATGAGCTT AGTGGAACGA TTCCTCGAGA AACAGGTGGA GCTGTTTCTT TGGAGGGGTT GAGACTTGAA AATAACTTGT TGGAGGGAAG TATTCCATCT TCCATCAAGA ATTGCAGTTC CCTTCGGTCT TTGATTCTGT CACATAACAA GCTGATAGGC TCAATTCCAC CAGAACTCGC GAAACTTACC AAACTCGAAG AAGTCGACTT ATCATTTAAT GAACTGACCG GAACGCTTCC TAAACAGTTG GCTAATCTCG GCTATCTCCA CACCTTCAAC ATATCTCATA ACCATCTCTT TGGGGAACTA CCTGCAGGTG GAATCTTCAA CGGTTTATCC CCAAGTTCAG TTTCAGGAAA CCCGGGAATT TGCGGTGCTG TTGTCAATAA GTCTTGTCCT GCTGTCTCCC CTAAACCGAT TGTGTTGAAT CCTAATGCAA CTTTCGATCC TTACTCGGGT GAAGTAGTGC CTCCTGGTGC TGGTCACAAA AGGATACTCC TTAGTATATC TTCTTTGATA GCCATTAGTG CTGCTGCAGC CATTGTGGTT GGTGTGATAG CCATCACAGT ACTTAATCTG AGAGTCCGCG CATCAACGGT TTCAAGATCA GCTGTACCGC TCACGTTCTC AGGCGGAGAT GACTTCAGCC GATCTCCCAC TACTGACAGC AACTCAGGGA AGCTGGTGAT GTTCTCTGGT GAACCTGATT TCAGCACTGG AACACATGCT CTACTGAACA AAGACTGTGA GCTCGGTCGA GGTGGATTTG GAGCAGTCTA CAGAACAGTT ATCAGAGATG GGTATCCTGT AGCTATCAAG AAGCTCACTG TCTCAAGTCT TGTGAAGTCT CAGGACGAAT TCGAAAGAGA GGTCAAGAAA CTTGGAAAAC TCAGGCATTC GAATCTGGTT AAACTCGAAG GATATTACTG GACAACTTCT CTTCAGCTTC TGATCTATGA GTTTCTCTCT GGTGGGAGTT TATACAAACA CTTGCACGAA GCACCAGGAG GTAGTAGTTC GCTTTCTTGG AATGATCGGT TCAACATTAT CCTTGGTACA GCGAAATGCT TAGCCTACTT GCACCAATCA AACATCATCC ACTACAACAT CAAATCGAGC AACGTGTTGC TAGACAGCTC TGGTGAGCCT AAAGTAGGAG ACTACGGATT AGCGAGGCTG TTACCCATGC TAGATAGGTA CGTGCTGAGC AGCAAGATAC AGAGTGCTTT GGGATACATG GCTCCAGAGT TTGCTTGTAG AACGGTGAAA ATAACAGAGA AATGCGATGT TTATGGATTT GGAGTCTTGG TTCTTGAAGT GGTTACAGGT AAAAAGCCTG TGGAGTATAT GGAAGATGAT GTTGTGGTTC TGTGTGATAT GGTGAGAGAA GCTCTTGAAG ATGGAAGAGC AGATGAATGT ATTGATCCGA GGCTGCAAGG GAAGTTTCCG GTAGAAGAAG CAGTTGCAGT GATAAAGCTA GGGCTTATTT GCACTTCTCA GGTTCCATCA AGTAGACCAC ATATGGGAGA AGCTGTTAAC ATATTGAGGA TGATCAGATG CCCTTCAGGG AGCTCAGATG AGTTGGGTTC GAGTTGAAAA GAAAGTAAAA ACTAACAT 
Length2938
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16916433.. 16919464
Download Sequence
A.thaliana
AGI-codeAT3G56370.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.83095 Ahg485285 IQ-domain 21
12 Ahg480225 xyloglucan endotransglucosylase/hydrolase 4
13.0767 Ahg949389
13.4164 Ahg480375 arabinogalactan protein 9
14 Ahg941617 germin 3
15.1658 Ahg474093 Calcium-dependent protein kinase (CDPK) family protein
15.4272 Ahg943148 Cupredoxin superfamily protein
16.1245 Ahg941021 early nodulin-like protein 17
16.2481 Ahg492954 chromomethylase 2
16.9115 Ahg473597 2-oxoacid dehydrogenases acyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression