Detail



ID : Ahg938662

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938662|scaffold_502853.1
Sequence
GCATTCGTTG GAATCGAAAA ATGGGACGAA TCGGTTTAGT TGTGTCTGAT CTGGTATTGT CGTTCATGTG GATATGGGCA GGAGTTCTGG TCAACATTTT AGTCCATGGA GTTCTTGGAT TTAGCCGGAG CGATCCCTCC GGTGAGATCG TTCGTTATCT CTTCTCTATC ATCTCCATGT TCATCTTCGC CTTCCTTCAA CAAATCACCA AAGGCGGACT TTATAATCCT TTGACCGCTT TGGCTGCTGG AGTCTCCGGT GGCTTCAGCA GTTTCATCTT CTCCGTCTTC GTTCGAATCC CCGTCGAGGT AATGGGATCA ATTCTTGCGG TTAAGCATGT CATTCACGTA TTCCCTGCGA TTGGGAAAGG ACCTAAACTA CAAGTAGCAA TCCATCACGG TGCTTTAACA GAAGGGATAC TAACATTCTT CATTGTACTG CTCTCATTGG GACTCACAAG AAAAATCCCG GGAAGTTTCT TCATGAAGAC TTGGATTGGT AGTCTTGCTA AGTTAACTCT TCATATTCTT GGCTCTGATC TTACCGGCGG ATGCATGAAC CCTGCAGCTG TTATGGGATG GGCTTATGCA CGAGGTGAAC ATATAACAAA AGAGCATTTA CTTGTGTATT GGCTTGGACC TGTGAAGGCT ACATTGCTTG CAGTTTGGTT CTTCAAAGTT GTGTTTAAGC CTCTCACCGA AGAACAACAG AAACCTAAGG CTAAAACTGA GTGAGGAATG AGAAATGAGC TCAGC 
Length755
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17176022.. 17177227
Download Sequence
A.thaliana
AGI-codeAT3G56950.2
Descriptionsmall and basic intrinsic protein 2;1
TAIR curator summaryOne of the Major Intrinsic Proteins(MIPs) which facilitate the passive transport of small molecules across membranes.Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER.
Alias[SIP2][SIP2;1][SMALL AND BASIC INTRINSIC PROTEIN 2][small and basic intrinsic protein 2;1]
Gene coexpression
MR
MR Locus Description
6 Ahg477717 AT hook motif DNA-binding family protein
9.05539 Ahg945213 NAD(P)H dehydrogenase B1
12.3693 Ahg478222 mRNA capping enzyme family protein
13.3041 Ahg473263 multidrug resistance-associated protein 1
23.9583 Ahg312683 pfkB-like carbohydrate kinase family protein
27.7489 Ahg479664 DNA binding
31.607 Ahg923075
38.3406 Ahg472320 tonoplast monosaccharide transporter1
41.328 Ahg491854 regulatory particle AAA-ATPase 2A
42.2493 Ahg496866 natural resistance associated macrophage protein 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression