Detail



ID : Ahg939046

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939046|scaffold_503237.1
Sequence
CTGCAAACGA GCGTGTTGTT ATGAAGGAGG AAGAAGAAGA AGCAGTGATA TCGAACGGCA TGAACGACGA CGACGATACT AACAATATTA ACAGTTCCAG TGAATTTGAT AACAATCGTA TCGGAGACGG TGACGGAGAC GATAACTGTA ATCTGAATCA GATCAAACAA GTATGGGGAA CGTGGGACGA GTTGGTGTTA ACATGCGCCG TTAAGCGTCA TGCTTTTTCC GATTGGGACT CCGTCGCTAA GGAGGTTCAG GCTCGTTCCC GGAGTTCTCT CATCGTCTCC GCTGTCAATT GCAGGCTTAA GTATCAAGAT CTCAAACGTA GGTTCCAAGA TTCCGTCGAC GTCGGAGAAG AGAACAGCGA AGCGGCGACG GCGGAGGAGG ATGAAGTCGG TGAAATCCCT TGGCTCGAGC AGTTACGGAG TCTTCGTGTG GCGGAGCTCC GCCGTGAGGT TCAACGATGT GACGACTCGA TACTGTCGCT TCAGTTAAAA GTTAAGAAAT TAGAGGAGGA GAAAGACGGA GATGATGGAG ACAATAAACC AGATCTGAAA AAGGATGAAA CTAAACCGGC GAGACTTAAC CGGGAAACGA CGGAGTCTGA CCGGGAGGAT AATAGGTCGA TGAACGAGTC CAACTCGACT GCCTCCGTCG ATAAAATAGC CGATCACGAC GGATTAGACG GAGATAAAAT GGTTCAGACT GACGAGAATT CGAGAAATCC AGATCCCGAT CCGGTTAATA AGGCGGCGGC GCCGGAGGAG GAAGAACGCA CGGTTAGTAA AAGATCGGAA ATGAGTAACT CGGGCGAGTT GGATGAATCG GGAACGTCCA CTGGTCCTGG AAAGAGGAAA GGACAGAAAT ACAGAAGCGG CGGAGGCGGC GGTGATATCA AATCGGCCGG TGATAAATCA CAGCCGTTGA TAGATATCAT TAAGCTAATT CGGTCTCATC CCCGTGGTTC CGTGTTCGAA TCCCGGCTTA GGAGCCAGGA GACAAAGGAT TACAAGAGGT TGATAAGGCA GCATTTGGAC ATCAAGACAA TAGAGAAGAA GATTGAGAAA GGATCTTATG TTTCTTCAAG CCTTTCTTTC TACAGAGACC TCAAGCTTCT CTTCACAAAC GCCATTGTCT TCTTTCCTAC ATCTTCCTCA GAATCCATGG CTGCTCAAGA GCTAAGAACC CTCGTCTCTA ACGAGATGAA GAAACGAACG GGAAAATCTG GTCACAATGT CATCAAAGCA GAGGCTGAAT CAAACGAACA GAAATCCTCT GTTCTTCCTC TTGTTGCCTG TAAAAAGAAG AGTTCTGCTT CAAAAAAGAC GCCTCCTTCA AATTCTAAAC AAAAAGATGA GAAGAAATCT CAGGAAGTCT CAGAGGAGAA GACTGTGACT ACTACTACTA CTACTAGTGC AAGAAGCTCT AGGAGAACGA GCAAAGAGAT CGCTGTTGTT GCTAAAGATA CTAAAACGGG AAGAGCCAAG AATAATAATA AGAAACAAAA GGATACGAAA ACAGAATCAT CTGATGATGG TGATGATGAT GAGAAGGAAG AGAATTCTAA AACAGAGAAG AAGACAGTAG CGATAGCAAC AGATAAGAAG AAGAGCGTGG CTGATTTTTT GAAGAGAATA AAGAAGAACT CTCCACAGAA AGGAAAAGAA ACAACGAGTA AAAATCAGAA GAAGAGTAAT GGAAATGTTA AGAAAGAGAA CGATCTTCAG AAGAAGACCG ATGGAAATGC TAAGAAAGAG AACAGTAAAG CGAAACCGAG GGAATTGAGG AGTAACAGTA CTGGTAAAAA GAAGGCTGAG GTAGAGACTG ATAATAATAA TAAGAGTTCA TCGAAACGAA AACAAACTCA AGAAACAGCA GAGGCAACGG GAAAACGAGG TAGAGAATCC GGAAAAGACA ATAAGCAGCC AAAGAAAAGA AGCAGAAGAT GAAACTAAAT TAGCCTGTGG TTA 
Length1973
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18601002.. 18604170
Download Sequence
A.thaliana
AGI-codeAT3G60110.1
DescriptionDNA-binding bromodomain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12 Ahg490909 conserved peptide upstream open reading frame 49
12.6095 Ahg488679
13.4164 Ahg481281 LJRHL1-like 1
26.5518 Ahg475116 WRKY family transcription factor
29.7321 Ahg934176
35.2562 Ahg477807 RING/U-box superfamily protein
36.606 Ahg350003 Amidase family protein
39.0512 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
39.1535 Ahg473000 dihydrosphingosine phosphate lyase
39.2938 Ahg337666 cellulose synthase like E1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression