| Annotation |
|---|
| Description | jgi|Araly1|490909|fgenesh2_kg.7__342__AT4G36988.1 |
| Sequence |
TCTAGAAACA GCATCCATTT TTTATCTTAA TTTTTTTTTT TTTTTCAAAG GTAGGACCAA CATTTGGGAT CTATAAATCT TTCTACTACG TTATATAGAG ACCCTTCGAA ATAACACTTA ACTAGTTTAT ATATTTTAAT CACACGGATT AGCTCCGGCG AATTATGGTC GTCGTCTTCA TCTTCTTCCT CCATCATCAG ATTTTTCCTT AAATGGAAGA AACCAAACGA AACTCCGATC TCCTCCGTTC TCGTGTTTTT CTCTCTGGCT TTTATTGCTG GGATTGGGAA TTTCTCACCG CTCTCTTGCT CTTTAGTTGC TAAATCTTTT TCATTTCCAA TCTTTCTTCT TCTTCTTCTT CTCTTTTGTG TTTAGATTAT TTTTAGTTTT AAAAAAATAA AAAAGATCGC CGGAGATGAC GGCGGTGACG GCGGCGCAAA GATCTGTACC GGCGCCGTTT TTAAGCAAAA CGTATCAGCT AGTGGATGAT CATAACACAG ACGACGTCGT TTCATGGAAC GAAGAAGGAA CAGCTTTTGT GGTGTGGAAA ACAGCAGAGT TTGCTAAAGA TCTTCTTCCT CAATACTTCA AGCATAACAA TTTCTCAAGC TTCATTCGTC AGCTCAACAC TTACGGATTT CGGAAAACTG TACCGGATAA ATGGGAATTC GCGAACGATT ATTTCCGGAG AGGCGGAGAG GATCTGTTGT CGGAGATAAG ACGGCGTAAA GCGGTGATTG CCTCAACGGC GGGGAAATGT GTTGTTGTTG GTTCGCCGTC TGAGTCAAAT TCTGGTGGTG ATGATCACGG TTCAAGCTCC ACGTCATCAC CCGGTTCGTC GAAGAATCCT GGTTCGGTTG AGAACATGGT TGCTGATTTA TCAGGTGAGA ACGAGAAGCT GAAACGTGAA AATAATAACT TGAGCTCGGA GCTCGCGGCG GCGAAGAAGC AGCGTGATGA GCTAGTGACG TTCTTGACGG GTCATCTGAA AGTCAGACCG GAGCAAATCG ATCAGATGAT CAAAGGAGGG AAATTCAAAC CGGTTGAATC GGACGAAGAG AGTGAATGCG AAGGTTGCGG CGGCGGAGGA GCAGAGGAGG GGGTAGGTGA AGGATTGAAA TTGTTTGGGG TGTGGTTGAA AGGAGAGAGA AAAAAGAGGG ACCGGGATGA AAAACATTAT TTGGTGGGTG GGTCCGGTAT GACGGAAATA AAGAACGTGG ACTTTCACGC GCCGTTGTGG AAAAGCAGCA AAGTTTGCAA CTAAAAAAGA GTAGAAGACT GTTCAAACTT CAAACCATCG TGTGACACGT CATCGACGAA GACGAAAAAA ATTTTTCCGT AAGGGAAATA AGTTATTAAA AGTGAAGAAG GTCCAGAAGG ATCAACGCAA ATATTTAATT AGTGTATTAC AAAAGTAAGA CAGATGTTGA AGTTTAGTAA ATTGTTGCTT AATTTTATTT CTTATATGGT CTATAAGCTC CATGTGTACT TTGTTGAAAC TTGAAAAAGA GAAAGAAAAT GAAGAATTTT TTTACTTTTC TCACGTTTAT TTTTGATTTA TTTTCTTTGC AAGTAGTAGG TGATTTCCGT GTTTTTACGT AATCCGTTGA ATATTTTCCA TCAAAATTGT CTTTGAAAAA AGTCACAAAA ACATT |
| Length | 1655 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 1417983.. 1419976 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G36988.1 |
| Description | conserved peptide upstream open reading frame 49 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF49 represents a conserved upstream opening reading frame relative to major ORF AT4G36990.1 |
| Alias | [CPuORF49][conserved peptide upstream open reading frame 49] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg934965 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 2.82843 |
Ahg927863 | cytochrome P450, family 87, subfamily A, polypeptide 9 |
| 4.24264 |
Ahg944213 | other RNA |
| 6.7082 |
Ahg488679 | |
| 11.8322 |
Ahg471986 | D-3-phosphoglycerate dehydrogenase |
| 12 |
Ahg939046 | DNA-binding bromodomain-containing protein |
| 12.2474 |
Ahg470785 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 13.1149 |
Ahg919779 | branched-chain amino acid transaminase 2 |
| 15.1987 |
Ahg907524 | glutathione S-transferase TAU 15 |
| 15.8745 |
Ahg473243 | inositol transporter 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|