Detail



ID : Ahg939073

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939073|scaffold_503264.1
Sequence
CTCGAGATCT CTAATTCGAC AATGGCGTCT CCCAATCCCT ACACCAAGCG TCGCTCTCCG CCTAATGTCG TCGTACCGCC GTCTACACAG CCTCGGTCTA AATCCACCGG AGGAGGATTT TTCTGTAAGT CTGTTCTGTT CGCTCTCTTT CTCTTCGCCT TGCCGTTGTT CCCTTCTCAA GCTCCTGATT TCGTCGGTGA GACTGTGCTC ACCAAGTTCT GGGAACTGAT TCACCTCCTA TTCGTCGGCA TTGCTGTTGC TTACGGTTTG TTTAGCCGTA GGAATGTTGA ATCCGGTGTT GATTTAAGGA TGAATCGTGT AGATGAGTCT TCTTTGTCTT ATGTATCTAG GATCTTTCAG GTTTCTTCTG TTTTTGACGA AGAGTTTGAT GAGAATTCTT GTGAGTTTGT TGATGTGAGG AGTGAGAGTG TGAGTGCTCG AGCTTCTGTT GTGGGGAAAT CTGAGTCTTT TGTTGTTGAA AGTGAATTGG AAGAATCGTC TGAATTTGGT GAAACTAATG AAGTCCGAGC TTGGAATTCG CAGTATTTTC AGGGGAAATC TAAGGTTGTG GTTGCTCGAC CAGCTTATGG TCTTGATGGT CATGTTCTGC ATCAGCCGTT AGGCTTGCCG ATTAGGAGTT TAAGGTCAGC TTTGAGAGAT AATGCTGCTC CTCAAGATAC CTCTTTTACT GATAACTGTG ATGGAGCTGT TAACGGGGAA GCTGAGTCAT TATTGGCTGA TGAGGTCTTG GCTGATCCGG CTTCACCTGC TCCATGGCAA TCTAGACCTG AAATGATGGG AATGGGAGAC AACTATCCTT CAAATTTCCA GCCTCTATCT GTGGATGAAA CCCAGTTTGC TACTCTTAAA TCCACATCTT CTCGGTCTAG TGCTTCTTCT TCATCTCAAA CTAGTTTTGC ATCCCATATT CAGAACAGAT TCTCGCCTTC TCGATCTGTT TCTGCAGAGT CACTAAACTC AAATGTGGAA GAGTTGGTCA AGGAAAAGAG TCTTCAGGGT TCATCACGGT CTAGTTCGCC ATCCTTGCCC CCATCACCTT CACTGTCTCC ATCTCCACCA TCGCCAGAAC TAGTGATCGA GGATACTCAC AGGCGTTTGC CAGAATTAGT AACCGATGAT ACTCACAGGC GTGCCTCACA TTCTCGGCAT TACAGTGATG GTTCCTTGTT AGAGGAAGAT GTAAGGCGGG GGTTTGAAAA TGAGTTGGAG GGGAGTAAAG TCAGAGGCAG AAAAACAGAA TCCTTCAGCA AAAAGGAACG GGGATCTAAA TCGCTTAATT TGGCAGCTGA AAGTTCCCGG AGAGGGAACA AGTCTCGGAG ATCCTATCCT CCTGAGTCCA TCTCATCTCC CATTGGTGGT GCTGATGACT CCACAACTAG AAGACGGGAT CTTCAGCAAA AGAGTGATGT CCATTTGCTT GAAGACAATA TCGGGAAAGG ACAGGAAGCT GACCATAACA ATCTTAGGGT CAAAAAGGGA AGGAGTCAAG ACTCTCTGGA GCTAACAGCA GAAGACTCTG CAAAAGATGA GAAGTTCAGT GAATCTTTTC CTGCTCTTGA TGTAGTGTTC CAGCCAACAA ATACTAAAGC TTCAAGGCGT GCAATGCATT CTTCACAAGG GGGACGTGAC ACTTTTCCGG AGAAAGCTGT CACAAGAAAC TTAGAGGATG ACTCTGAGGA TTACAATAAG TCCAGGAAAA AGGACCTTCC TGGTAATGAT AAGGAAGTGA AATCAAACAG TCCAAGACTT GAACTGCGTT CTTGGAGAGC TTCCAGTAAT GTATCATCGA GAGCAAAGTC CGTGAGGACC ATAAGATCTG ATCGTCATGG GAAAGGTTTA AAGACAGATG GAGATTCATG TGAAGACCGG ACAGAAGCTA AAGTAGAAAG CCGAGGAAGT ACGAAATCAA GAAGACAACG ACAAGAAGAA CTATCTATTG TACTACACCA GGAGAAAAGT TCAGAAACTC GCGCTAAATC CGAGCCAGAA GAGGTTGCTA TGGAAGAGCC CGAGGCCGAG CAGCAACCTC AAGTAACTTT GGAAGAGGAA GAAGAAGCTG ATTGGGAAAG CCAAAGCAAT GCAAGCCATG ACCATAATGA GGTTGATAGA AAAGCCGGTG AGTTCATAGC TAAATTCCGG GAACAAATTC GGTTACAGAA ACTCATATCG GGTGAACAAC CTAGAGGAGG AGGCACTGGT ATTTTCAGAA ACAGTCAATT CAGATGACAC TCACCACCAT TTATTTC 
Length2267
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18748383.. 18750670
Download Sequence
A.thaliana
AGI-codeAT3G60380.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
23.5797 Ahg941617 germin 3
29.2575 Ahg480563 plasma membrane intrinsic protein 2;8
33.4066 Ahg943148 Cupredoxin superfamily protein
34.5254 Ahg480193 O-Glycosyl hydrolases family 17 protein
35.6651 Ahg474511 O-fucosyltransferase family protein
48.621 Ahg485020 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
49.4469 Ahg486566 FASCICLIN-like arabinogalactan-protein 10
58.0517 Ahg479953 Fibronectin type III domain-containing protein
59.2368 Ahg497154 FASCICLIN-like arabinogalactan 2
62.8649 Ahg940652 Glycosyl hydrolases family 31 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression