Detail



ID : Ahg939281

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939281|scaffold_503472.1
Sequence
ACCCTAACTC CATCATCAGT CATGTCCCCC CTACGCCGCA TTATCCGAAA TGCGACCGTA TCAACGGCGG TTCCGGTTGC GAAGGCGTTC AAGCCTTACC CACTCGGAAG AGACCCTTCC TCACTCCCCA AGCTTAAGTG GGTATCGACC AGTGAGACCG ATAACCGCTC AATTTCTCTG CGCTACAGAG TCACGGCGAT GATAGAGATG TCTCTTCTCG ACAAAGCCGC GAATCTCTCA CGACTCGCTG TCTTGGACGA CTTTCGAGTC GACAGAGACA CCGTATTCAT CTGCAATTCC ATAATTGGCG CCATGTGCAG CGCAAAACGG TACGACGATG CCATCTCTCT GTTCAATTAT TTTTTTAACA AGTATCAAAC TCTGCCAAAC ACGCTCTCCT GCAATCTCAT CATCAAAGCA CACTGCAACC AATGTCACGT CGACGACGCT CTTGAGCTCT ACCGCCTCAT TTTGCTCGAC GGACGTTTAG CTCCGGGGAT CGAGACATAC ATGTTACTCA CGAAAGCCTT GGTTGATGCT GAAAGATTCG ACGAAGCTTG TGATTTAGTG AGTTGCATGA GCTCTTGTAG TTTCATGGTC TACGACATTT TAATCCGCGG GTTCTTGGAT GTAGGGAATT TCGTAAAGGC TAGCCAAATC TTCGAGGAAC TGAAAGGACT GGATAGTAAA CTTCCAGGGA GAGAATATCA CACGGCAATT GCAATCTTTA ATGTTTCGTT TATGAACTAT TTTTTCAATC AAGGCAAAGA TGAGGAAGCT ATGGAGATTC TCGCAACTCT GGAAGAGGCT CAAGTGTTGA AACCCATTGT CGGAAACAGG GTTTTGGATG TTCTTGTCTG GCACGGTAAG GATACAGAGG CCTGGGAATT GTTTGAAGAG ATGATAGAAA TCTGTGATTC CGAGACGATT GACATAATGT CCGACTATTT TAGTGAAAAG ACTGTGCCAT TCGAGCGGCT TAGGAAAACG TGTTACACGA ATATGATCGT GAGTCTCTGC GAGCATGAAA AAGTATCAGA CGCAGAGAAA CTCTTCGCCG AGATGTTTAC TGACGTTGAC GGAGAGGACT TGTTCGTAGG GCCTGACGTC TTAACATTCA GAGCAATGAT CAATGGATAT GTTAAGGTAG GGAGATTCGA TGATGCTATC ATGACCTTGA ACAAGATGCG AGTTTTATAT ATCAGAAAGC TTGCTATTCA TCATGCACCA TAAGTTGCAT TTGTGGTTTT TTTAAG 
Length1256
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19501940.. 19503201
Download Sequence
A.thaliana
AGI-codeAT3G60960.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg922041 Receptor-like protein kinase-related family protein
47.5605 Ahg915590 Disease resistance protein (TIR-NBS-LRR class)
50.9902 Ahg916833 Phototropic-responsive NPH3 family protein
55.857 Ahg902855 Pentatricopeptide repeat (PPR) superfamily protein
64.7457 Ahg945078 Protein of unknown function (DUF3531)
73.0069 Ahg489460
73.8647 Ahg919808 Tetratricopeptide repeat (TPR)-like superfamily protein
79.6241 Ahg897165 receptor-like kinase
86.3713 Ahg929286 TCP family transcription factor 4
89.6493 Ahg315354 Nucleoporin autopeptidase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression