| Annotation |
|---|
| Description | jgi|Araly1|915590|Al_scaffold_0008_341 |
| Sequence |
ATGATCGTCT ACATCAGCTG CGTAGATGAG GTACGGTACT CCTTCGTCAG CCACCTCTCC GAATCTCTCT GCGAAAAAGG CATAAATGAT GTGTTCGTCG ATAGCGCCGA CAACCTTTCG GAGGAGGCCC AGGCAAAAGT CGAGAGAGCT AGGGTTTCTG TGATGGTTCT ACCCGGGAAC CGCAAGCTCA CCACGGCGTC GGCATGCCTT GGCAAGCTCG GGAAGATCAT CAGGTGCCAG AGGAACGACG ACCAGGTGGT GGTTCCAGTG CTCTATGGCG TCAGAAAAGT AAATGTCGAA TGGCTTAGCG AGCTGAAGAA GATCACAGGC TTATCACATT TCCACCAGTC CAGGAAGGAA TGCTCCGACT CCGAACTTGT TGAAGAGATC GCTAGAGATG TGTATGAGAA GCTATACCAT ATTGGACGAA TTGGAATCTA CTCGAAGCTG CTGCAGATAG AAAACATGGT TAACAAACAA CCGTTGGGTA TCCGCTGTGT TGGAATCTGG GGTATGCCAG GCATAGGGAA GACGACACTT GCTAAAGCGT TTTTTGACCA AAAGTCTGGA AAATTTGATG CTTCTTGTTT TATCGAAGAC TTTGACAAAG TTATTCATGA GAAGGGTCTT TATCGTTTAT TGGGGAAACA ATTTTTGAAA GAAAAGCCTC CTGATGGTGT TACCACTACA AAACTGAGCA TGCTTAGATA TAAATTAAAG AATAAGAGAG TCCTTGTTGT TCTTGATGAT GTGTGCAATC CTCTGGCTGC AGAGTCTTTT CTTGGAGGGT TTGATTGGTT TGGTCCCGAA AGCCTGATCA TCATAACCTC TAGAGATAAA CAGGTGTTTC GCCTCTGTCA AGTCGATCAA ATATACGAGG TTCAGGGTTT AAATGAGAAA GAGTCTCTTA AACTCATTTC GTTGTATGTA TTTAGAAACG ACAAGGAAGA GCGGAATCTC CCAGAGCTGT CAATGAAAGT GATAAAATAT GCTAGTGGAC ATCCGTTAGC TCTCAATATT TATGGCAGAG AGCTAAAAGG TAAGAAAAAT CTATCAGAAA TGGAGACTGC ATTGCTCAGA CTCAAGCAAC GTCCTCCCGT CCAGATTTTT GATGCATTCA AGAGCAGCTA TGAGAAAAAA CTATCAGAAA TGGAGACTGC ATTGCTCAGA CTCAAGCCAC GTCTTCCCTT CCAGATTTTT GATGCATTCA AGAGCAGCTA TGATACACTC AATGACAGCG AAAAGAACAT TTTTCTAGAC ATTGCTTGTT TCTTCAGAGG AGAAAATGTG GACTACGTAA TGCAACTGCT AGAAGGTTGT GACTTTTTTC CGCATGTTGG AGTGGATGTG CTTGTTGACA AGGGCCTGGT GACTTTTTCA GAAAACATTT TGCAAATGCA TAATCTGATC CAGGATGTTG GCCAAGAAAT AATTAATGGA GAAACAATTT ATATTGAGAG GCGCCGTAGA CTGTGGGAAC CTTGGAGCAT CAAGTACTTA TTAGAAGATA ATGAACACAA AAGAACTTTA AAACGTGCTC AGGGCACCGA GGACGTCGAA GGCATCTTTC TGGACACAAC AGACATAAGT TTTGATATTA AGCCTGCTGC CTTTGATAAT ATGCTGAACC TTAGATTGCT CAAGATTTTC TGTTCCAATC CTGAAGTCCA TCATGTAATC AATTTCCCCA AAGGCTCTTT GTATACTCTT CCTAATGAGC TAAGACTCCT TCATTGGGAC AACTATCCTC TGCAATCTTT GCCTCAAAAG TTTGATCCTA GGCACCTCGT TGAAATCAAC ATGTCGTACA GTCAACTTCA GAAACTTTGG GGTGGAACCA AGAACCTGGA GATGTTGAGG ACGATTAGGC TTTGTCATTC CCAGGAACTA GTTGATGTTG ACGATCTTTC AAAAGCTCAA AATCTTGAGG TAATTGATCT CCAAGGTTGT ACAAGACTGC AGAGTTTCCC AGACACATGT CAATTGCTAC ATCTACGAGT AGTAAATCTC TCAGGTTGCT TAGAGATCAA AAGCGTCCCG GATTTTCCAC CAAATATTGT GACACTACGT CTAAAGGGGA CTGGCATAAT AAAACTACCA ATTGCCAAGC GGAATGGTGG AGAGCTTGTT AGTCTTTCCG AATTCCAAGG TCTTTCAGAT GACTTGAAAC TTGAGCGTTT GAAAAGTCTG CAGGAATCTA GCTTATCTTG TCAAGATCTT GGTAAGCTTA TCTGCTTGGA TCTGAAAGAT TGTTTTCTTT TGCGAAGTCT GCCAAACATG GCTAACTTAG AACTTCTCAA AGTTCTTGAT CTCTCTGGTT GCTCAAGGCT CAATACTATT CAGAGTTTCC CTCGTAACCT GAAAGAGTTA TATCTTGTCG GCACTGCAGT AAGACAAGTG GCACAACTTC CTCAAAGTCT AGAACTTTTG AATGCACATG GATCTCGTTT GAGAAGTCTG CCAAACATGG CTAATTTAGA ACTTCTCAAA GTTCTTGATC TCTCTGGTTG CTCAAGGCTC GCTACTATTC AGAGTTTCCC TCGTAACCTG AAAGAGTTAT ATCTTGCCGG CACTGCAGTA AGACAAGTGC CACAACTTCC TCAAAGTCTA GAATTCATGA ATGCGCATGG TTCTCGTTTG CGAAGTCTGT CAAACATGGC TAATTTAGAA CTTCTCAAAG TTCTTGATCT CTCTGGTTGC TCAAGGCTAG ATACTATTAA GGGTTTACCA CGGAATCTAA AAGAGTTAGA TATTGCTGGC ACATCGGTAA GAGGATTGCC ACAACTTCCT CAAAGTCTAG AACTCTTGAA TTCACATGGC TGTGTATCTC TGACATCCAT TCGTTTGGAC TTCGAGAAGC TTCCTATGCA TTACAATTTC AGTAATTGTT TTGATCTATC TCCACAAGTG GTCAACAATT TTTTAGTGAA AGCGTTGAAT AATTTCAAAT ACATACCAAG AGACCATCAA CAAGTAATAC TCTCTATGTC TCTCTCTCTC GTCTATACCC AGCAACACCT TTCTCTATCA TACATGACTT ACTTTGCGTT ATTGCAACAG GAACTCAATA GAGCTCTGGC TTTCAGCTTC TGTGCGCCCT CGCATGCGAT TCAGAATTCC ACACTTGATC TGCAACAAGG ATCTTCTGTA ATGGCACGAC TGAATCCTTC TTGGAGGAAC ACGCTTGTGG GCTTTGCTAT GCTGGTGGAA GTTGCATTTT CTGAGGATTT CTATGATGCT AATGGTTTTG GCATTAGATG TGTTTGCAGA TGGAAAAACA AGGAAGGCCA CTCTCATAAG ATAGAAAGAA ATTTGCATTG TTGGGCTCCA GGAAAAGCTG TTCCAAAACT TCTAAATGAT CATATGTTTG TCTTCTTTGA TGTCAACATG CGTCCAGGTA CTGATGAAGG AAGTGAACCC GATATATGCG CTGATTTTGT AGTGTTTGAA TTCTTTCCTG TCGACAAGCA GACAAAGCTT CTATATGATA GTTGCAAAGT GACAAAATGT GGAGTCCGTG TATTAACTGC TACAACTCGT GATACCAGCC TTGAGAATGT TTTACCAGTT TTGTCCTCTG ATCCAATGGA GTTTTCTGGT AATGAAGTTG AAGAAGTACC GAGAGTCAGT TATGATGGTT TACAGGAGAT GTATAAAGCT TTATTTCTTT ACATAGCAGG TTTGTTCAAT GACGAGGATG CTCGTTTGGT GGCACGACTT ATTGCTAAAA TTATTGACAT GGACGTTAGT TATGGGCTCA AGGTCTTAGC CGATAGGTCT CTCATTCGTG TATCCTCCAA CGGGGAAATA GTGATGCATT GTTTGCTACG AAAAATGGGT AACGAAATCC TCTCTAGTGA ATCCATGCTG CCTGGTAGCT TGAAAGATTT AGCACGAGAC TTTGAAAATG TCTCTGTGGC TTCTACACAA ACTTGGAGAT CAAAGAAGTC AAGATTACTG CATTGGGACG CATTCCCAAT GAGATGCATG CCTTCTAACT TCCATGGAGA AAGTCTCGTT GACCTCATAA TGGAGGCTAG CAAGCTTGAG ACGCTGTGGA GTGGACTCAA GCTGCTTAAT AGTCTCAAGG TTATGAGTCT ACGATGCTCC TTAGACCTGA GGGAAATCCC AGATCTTTCG TTGGCCACTA ATCTTGAGAG ATTGGATCTT GGCCATTGCT CGAGTTTGAA GATGCTTCCT TCCTCTATTG GGCATCTCCA TAAGTTGAAG GACTTGGACA TGGAATTTTG CACATATCTC GAGGCTCTTC CAACCGGAAT AAATTTGAAA TCTCTCTATT ACCTCAACCT CAATGGATGC TCACAGTTGA GAAGTTTCCC TCAAATTTCA ACAAATATTT CAGATCTCTA TCTTGATGGA ACTGCCATAG AGGAAGTTCC TACGTGGATC GAGAATATCT CTAGTCTCTC TTACCTATCG ATGAATGGTT GCAAGAAGTT GAAAAAGATC TCCCCAAACA TCTCTAAACT GAAACATCTT GCAGAGGTAG ACTTTTCAGA ATGCACGGCA CTGACTGAAG ATAGTTGGCC GAACCATCCT GGTGGGATCT TCACGTCCAT CATGAGAGTA GACATGTCTG GTAACAGTTT CAAGAGTCTT CCAGACACAT GGACTTCCAT TCAACCAAAA GACCTTATCT TCAATAATTG CAGAAATCTT GCGTCACTGC CAGAGCTTCC TGCGTCGCTC TCCATGCTAA TGGCTAATAA TTGTGGATCA CTTGAGAATT TAAATGGCTC CTTTGACTAC CCACAGATGG CTCTCCAATT TATTAACTGT TTCAGTCTAA ATCATCAAGC GAGAGAACTC ATCCTACAGT CAGATTGCGC GTATGCTATC TTACCGGGTG GTGAACTTCC TGCACATTTC ACTCATCGAG CTTATGGGAG TGTCCTAACC ATTTATCTTT TCAAAAAGTT CCCAACTTTT AAGGCTTGCA TCGTGGTTGA ATCAAGATCT GGTTCGTTTA CCTTTGGGGT ACTTTGGGCC TTCAAAGGTG GAAGCAATAA TATATATTTT AGTTGTTTGA CCAACACTCC CTCTACGGAG AATCATCTCA TCGTATTCAA TTGCGAGTTT TCTCCGGATG AAGTCAATGA TTCCCCAGCT GAGCTGAGCT ATAACGATGT GCAGTTTGAG TTTGTTTGCC TTGACCATAG GAAAGAAAAG ATAAAGATAA AGGAATGTGG TATACAACTC TTTGAGGGCT CTTCATTTGC TGACGATAGT GGTAAAAGAT CTGAAACTGA ATATGGCAAC GACTCTGGAT TGACAAATGT AGAGGATACT GCAAGCAGCA AGAGAATGCG TGTAAGAATT AATGAGTTAT CAAACATTTA CTGTCTCTTT TTTATTGCTT TTCCAAGATC ACATAAAACA GCTCAAGAAC CTTCTGTTTA TTCTGAAAGT CAAAGATTGG AGATAGAACA AATCATGATG ACTTTCAAAG GTGAATCACA TAAGGAAATT ATGGTAATGA GGCTGGAACT CAGATGA |
| Length | 5517 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 2029709.. 2037470 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G45260.1 |
| Description | Disease resistance protein (TIR-NBS-LRR class) |
| TAIR curator summary | Confers resistance to Ralstonia solanacearum. Similar to NBLS-TIR resistance genes,and also contains similarity to transcription factors. Interacts with pathogen effector protein AvrPop2. |
| Alias | [ATWRKY52][RRS1][SLH1][ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52][RESISTANT TO RALSTONIA SOLANACEARUM 1][SENSITIVE TO LOW HUMIDITY 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg948486 | Disease resistance protein (TIR-NBS-LRR class) |
| 12.2066 |
Ahg948494 | Disease resistance protein (TIR-NBS-LRR class) |
| 15.4919 |
Ahg948569 | Trypsin family protein |
| 35.1426 |
Ahg897230 | Disease resistance protein (TIR-NBS-LRR class) family |
| 36.7015 |
Ahg915594 | Disease resistance protein (TIR-NBS-LRR class) |
| 40.9512 |
Ahg943494 | poly(ADP-ribose) polymerase |
| 43.3128 |
Ahg470748 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| 44.0454 |
Ahg483767 | |
| 47.5605 |
Ahg939281 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 56.921 |
Ahg495363 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|