Detail



ID : Ahg939468

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939468|scaffold_600012.1
Sequence
AAAAAAGAAG ACCAGATAAG ATGGCCTCTC TTCTCTCTCC CGCCACGGCC ACGGCCACCG CCACCTCCGC CGCTTTTCAT TCCTGCTCCA CCGCCGGTTT CCCCACTCCC ACTCACATTT CATCCCAGAA CAGCAGCCGC CGGGCTTATT CTTATATGAT GAGATGCAGT TTTTCTCCGC AGGACTTATC TGTTGAGTCT CTCTCTCATC TCCCTGCTTT CCATGACTTT CAGAATTCCC TCGCCACATT TTCGAATACC CAGAAATGGG AGTTCTTTTT CCCCGCCGGA CTCGTCTGGT TTTACCTCAC GGCGAGGCCT GGTGTTCTCA TCGGCGCCAT TGACGCCTAC CTTCTCGCTC CGCTCCAGCT TGGCCTCGAC ACTCTGATTG GTAGGAGGTT GAAGAGGTCC GATTTCTTGG TCACGGAGAA ACTCGGCGAA GGCTCTTTCG GCGTCGTCTA TGCCGGCGTC CTACTCCCCA AGAATTCTAC TGTTGTTGAT GAGGCTAGGC TTAGCAAAGC AAGAGCTAAA GCTATGGAAT TTACCGGCGA ATTCAAGCAG AGAGTCATCC TCAAGAAGGT CAAGGTGGGA GTACGAGGGG CTGAGGAATT CGGCGAGTTC GAAGAGTGGT TCAACTACAG ACTCTCAAGG GCCGCTCCTG AGACCTGCGC TGAGTTTCTC GGAAGCTTTG TCGCCGACAA GACCAATACT ATGTTTACTA AAGGCGGCAA ATGGCTTGTC TGGAGGTTCG AGGGAGACCG TGATCTCGCT GATTACATGA AAGATCGGAG CTTTCCTTCC AATCTGGAGT CCATCATGTT TGGGCGCGTT CTCCAAGGAG TAGAGTCTGT GAAAAGTCGT GCATTGATCA TTAAGCAGAT CATGCGCCAG ATCATTACAT CTCTCAAGAA AATCCATGAT ACGGGCATTG TTCACCGGGA CGTGAAGCCT GCCAACTTGG TGGTTACAAA GAAGGGCCAG ATTAAGCTCA TCGACTTTGG TGCTGCTGCT GATCTTCGCA TTGGCAAGAA TTACATCCCG GAACGCACTT TACTCGATCC TGACTACTGT CCTCCTGAGC TCTATGTCCT CCCTGAGGAA ACGCCAAGTC CTCCTCCCGA GCCTATTGCC GCTTTGCTTT CCCCGATTCT CTGGCAGTTG AACAGTCCGG ATCTGTTTGA TATGTATTCT GCTGGGATTG TGCTCCTGCA AATGGCGGTT CCGACCTTAA GATCTACTGC CGGTCTGAAG AATTTTAATC TGGAGATCAA GTCAGTTGAA TATGATCTTA ATAGATGGCG GGACAGGACT CGGACGAGGC CAGACTTGAG CATACTAGAT CTGGACTCGG GCAGAGGGTG GGACCTCGTC ACTAAACTCG TATCCGAGAG AGGTTCTCTG AGACGTGGGC GCCTTTCAGC AGCTGCTGCT CTCAGACACC CTTATTTTTT GCTGGGTGGT GATCAAGCGG CCGCTGTTCT TTCAAAGCTC ACTTTCAGCA AGTGACTCTG ATTTTATTCT TATGATG 
Length1527
Protein Sequence
Protein Residue
Map Locationscaffold_6: 35664.. 37395
Download Sequence
A.thaliana
AGI-codeAT5G01920.1
DescriptionProtein kinase superfamily protein
TAIR curator summaryChloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2.
Alias[STN8][State transition 8]
Gene coexpression
MR
MR Locus Description
9 Ahg473938 mitochondrial lipoamide dehydrogenase 1
17.1756 Ahg489514 iron-regulated protein 3
17.5499 Ahg497434 PsbP-like protein 2
19.8997 Ahg912370 SET domain protein 35
21.7025 Ahg922594 myo-inositol monophosphatase like 1
24 Ahg473985 Protein of unknown function (DUF760)
24.3311 Ahg474689 Phosphoglycerate kinase family protein
24.5357 Ahg932140
26.7955 Ahg928473 Ypt/Rab-GAP domain of gyp1p superfamily protein
27.7489 Ahg909676 P-loop containing nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression