Detail



ID : Ahg473938

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473938|fgenesh2_kg.1__3892__AT1G48030.2
Sequence
ATGGCGATGG CGAGCTTAGC TAGGAGGAAG GCGTACTTTC TCACCAGAAA CTTATCCAAC TCTCCCACTG ACGCTCTCAG ATTCTCCTTC TCCCTCTCCC GTGGCTTCGC CTCATCAGGA TCTGATGAAA ACGACGTCGT CATCATCGGC GGCGGTCCCG GTGGTTACGT AGCCGCGATC AAAGCGGCTC AGCTTGGTCT CAAAACCACC TGTATCGAGA AACGCGGCGC TCTCGGTGGT ACTTGTCTTA ACGTCGGGTG CATTCCTTCG AAGGCTCTTC TTCACTCTTC ACATATGTAC CATGAGGCGA AACATGCGTT CGCCAACCAT GGTATTAAGG TCTCTTCGGT TGAGGTGGAT CTTCCTGCTA TGTTAGCTCA GAAAGATAAT GCGGTTAAGA ACCTTACTCG TGGTATCGAA GGTTTGTTCA AGAAGAATAA GGTGACTTAT GTTAAGGGAT ATGGTAAGTT TATTTCACCA AATGAAGTCT CGGTGGAGAC GATCGATGGA GGGAACACCG TTGTGAAAGG TAAACACATC ATTGTTGCTA CTGGCTCGGA TGTTAAGTCT TTGCCTGGTA TTACGATTGA TGAAAAGAAG ATTGTTTCGT CGACTGGAGC GTTGTCTCTG TCGGAAGTCC CGAAGAAATT GATTGTGATT GGTGCGGGGT ATATTGGGCT TGAGATGGGT TCTGTTTGGG GTAGGCTTGG GGCAGAGGTT ACGGTAGTTG AGTTTGCTGG GGATATCGTT CCTTCGATGG ATGGTGAAAT CCGTAAGCAG TTTCAACGTT CACTTGAGAA GCAAAAGATG AAGTTCATGC TCAAGACTAA AGTTGTATCT GTGGATTCCT CCTCTGACGG TGTGAAGCTT ACAGTGGAAC CGGCAGAAGG AGGAGAGCAG ACTATTCTGG AAGCCGATGT TGTGCTTGTC TCAGCAGGAA GAACACCGTT CACATCTGGA CTTGATCTGG AGAAAATCGG AGTAGAAACT GACAAAGCTG GGAGGATTCT GGTGAATGAG AGATTCTTGA GCAATGTCCC AGGCGTGTAT GCTATTGGAG ATGTGATTCC AGGACCAATG CTTGCTCACA AAGCCGAAGA AGATGGTGTT GCTTGTGTGG AGTTCATAGC AGGCAAACAC GGCCATGTGG ATTATGACAA GGTTCCTGGT GTTGTCTACA CGCATCCTGA GGTTGCTTCG GTTGGTAAAA CCGAAGAACA GCTGAAGAAA GAAGGTGTGA GTTACCGGGC TGGAAAATTC CCATTTATGG CAAATAGCAG AGCGAAGGCC ATTGATAATG CAGAAGGATT GGTTAAGATT CTGGCTGATA AGGAGACCGA TAAGATCTTG GGCGTTCACA TTATGTCTCC AAACGCTGGA GAGCTGATTC ATGAGGCGGT TCTTGCGATT AACTACGATG CATCAAGTGA AGACATTGCT CGAGTCTGTC ACGCTCATCC CACTATGAGC GAGGCTCTGA AGGAAGCCGC CATGGCCACA TATGACAAGC CCATTCACAT CTAAAGGGAA GAAGACCTTA AAGGAGAGAG CCACCTACGA CAAGCCAAAT CGATATCTTA AACGGGTTGG ATTTTGGTTT GGTTTTCTGT GGTTTAGCCT TCAATTTGTC CTTTATTACT AGTAGTGTTC TTCATATGTT CAGATTCGTG TTAAGCCTGA TCCTTAATAA ATATTCAACA TTCACTTAA 
Length1709
Protein Sequence
Protein Residue
Map Locationscaffold_1: 23268808.. 23270842
Download Sequence
A.thaliana
AGI-codeAT1G48030.1
Descriptionmitochondrial lipoamide dehydrogenase 1
TAIR curator summaryEncodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.
Alias[mtLPD1][mitochondrial lipoamide dehydrogenase 1]
Gene coexpression
MR
MR Locus Description
8.94427 Ahg473366 cytochrome P450, family 97, subfamily A, polypeptide 3
9 Ahg939468 Protein kinase superfamily protein
9.38083 Ahg477379 PsbQ-like 1
9.8995 Ahg473747 glyceraldehyde-3-phosphate dehydrogenase B subunit
10.5357 Ahg318010 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
12.8062 Ahg497434 PsbP-like protein 2
14.0712 Ahg486548 Transketolase
14.3527 Ahg346658 chlororespiratory reduction 3
15.0333 Ahg312432 RNA-binding (RRM/RBD/RNP motifs) family protein
15.7797 Ahg477371 carbonic anhydrase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression