Detail


ID : Ahg939897

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939897|scaffold_600441.1
Sequence
CTCAAATCCT GGACCCGGCT AATGGATCCC AGGATATCTA TTGATAAGCC GCCTCATCAC GATCCAATTC TGGGTGTATC TTCACGATGG AGCGTTTCTT CTAAAGACAA CAATTCCGTC AGAGAAGTTA CTTTCGGTGA TTTGGGTTCA AAGCGTATCC GTCATGGATC AGCTGGAGCT GATTCTGAGA TGCTAAGCAT GTCTCAGAAA GAGATCAAAG ACGAAGATGC TCGTTTGATT TATATTAACG ATCCTGACAG AACTAACGAA AGGTTTGAGT TCACAGGGAA TTCTATCAAG ACTGCTAAAT ACTCTGTCTT CACCTTCTTG CCTAGGAACT TGTTTGAGCA GTTCCATAGA GTTGCTTACA TTTACTTCCT TGTAATAGCA GTGCTTAATC AGCTTCCTCA GCTTGCAGTT TTTGGCAGAG GTGCATCAAT CATGCCCCTT GCCTTTGTTC TCTTGGTCTC AGCTATCAAA GATGCTTACG AGGATTTCCG GAGACATAGA TCAGACAGAG TTGAGAACAA TAGGTTGGCT TTAGTGTTTG AGGATAATCA GTTTCGAGAA AAGAAGTGGA AGCATATTCG GGTTGGGGAA GTCGTTAAAA TCCAATCGAA TCAGACTCTT CCTTGTGACA TGGTGCTGTT GGCTACAAGT GATCCTACTG GGGTTGTCTA TGTGCAGACG ACTAATTTGG ATGGTGAGTC GAATTTGAAG ACAAGGTATG CCAAGCAGGA AACTCTTCTG AAAGCTGCTG ATATGGAGTC GTTTAATGGA TTTATCAAGT GTGAGAAACC TAACAGGAAC ATTTATGGGT TTCAAGCCAA CATGGAAATT GATGGTAGAA GGCTCTCCCT TGGACCTTCT AATATTATTC TTAGAGGGTG TGAGCTTAAG AACACTGCTT GGGCTTTAGG GGTTGTTGTC TATGCTGGTG GTGAGACGAA AGCTATGCTG AACAACTCTG GAGCTCCATC AAAGAGGAGT AGGCTAGAGA CTCGGATGAA TTTGGAGATC ATTCTACTCT CTTTGTTTCT GATCGTCTTG TGTACAATTG CAGCCGCGAC CGCTGCTGTG TGGTTGAGGA CGCACAGGGA TGACTTGGAC ACTATTCTCT TTTATAGGAG GAAGGACTAC TCTGAGAGGC CAGGAGGAAA GAACTATAAA TACTATGGTT GGGGGTGGGA GATATTTTTC ACCTTCTTTA TGGCAGTCAT TGTGTACCAG ATCATGATTC CCATTTCTCT CTACATATCG ATGGAGCTTG TCCGTATTGG TCAAGCATAC TTCATGACCA ATGATGATCA GATGTACGAC GAGTCTTCAG ATTCAAGTTT TCAATGCAGG GCTTTGAATA TAAATGAAGA TTTAGGGCAG ATTAAGTATT TATTCTCTGA TAAGACGGGT ACACTCACCG ACAACAAGAT GGAGTTTCAA TGTGCCTGCA TAGAAGGCGT AGATTACTCT GCTAGGGAAC CTACTGAGAG CGAGCATGCG GGATACTCCA TTGAAGTTGA TGGGAATATT TTGAAGCCAA AGATGAGGGT TAGAGTTGAT CCTGTGCTTC TTCAGTTAAC GAAAACTGGC AAGGCAACAG AAGAAGCAAA ACGTGCAAAT GAGTTTTTCC TCTCGCTGGC AGCTTGCAAC ACAATTGTGC CAATTGTTAC CAGTACATCT GATCCCAATG TGAAGCTGGT AGATTATCAA GGGGAGTCCC CTGATGAACA AGCATTGGTT TATGCAGCAG CTGCATATGG TTTCTTGCTC ATAGAGAGAA CCTCTGGTCA TATAGTTATT AATGTGCGAG GAGAAATGCA AAGGTTTAAT GTTTTGGGAT TGCATGAGTT CGATAGTGAC CGAAAAAGAA TGTCAGTGAT ACTGGGATGC CCCGACATGT CGGTAAAACT CTTTGTAAAA GGTGCAGACT CATCTATGTT TAGTGTCATG GATGAATCCT ACGGTGGCGT CATACAGGAG ACCAAGATAC AACTTCATGC TTACTCATCT GATGGTTTGA GAACTCTTGT TGTTGGGATG AGAGAGCTGA ACGATTCAGA GTTTGAGCAA TGGCATTCTT CATTTGAGGC GGCAAGCACC GCCTTGATTG GTAGGGCTGG GTTGCTAAGA AAGGTTGCTG GAAACATCGA GACTAACCTT AGGATAGTAG GAGCCACTGC AATTGAAGAC AAATTGCAGC GTGGTGTCCC GGAAGCAATC GAGTCTCTCA GGATTGCAGG GATAAAAGTA TGGGTCTTAA CTGGTGACAA GCAAGAAACT GCCATATCCA TTGGCTTTTC TTCGAGGCTT CTAACAAGAA ACATGAGGCA AATAGTAATA AATAGTAATT CATTGGATTC ATGTCGGAGG AGTTTAGAAG AAGCAAATGC CAGTATTGCA AGTAATGATG AAAGCGATAA CGTGGCCTTG ATTATTGACG GTACCAGTCT CATATATGTA CTCGACAATG ATCTTGAAGA TGTGCTGTTC CAGGTGGCAT GTAAATGCGC TGCGATACTC TGCTGCCGGG TTGCTCCTTT CCAGAAAGCT GGAATCGTTG CACTTGTAAA GAACCGGACT TCCGACATGA CGCTTGCCAT TGGTGATGGT GCCAATGATG TCTCCATGAT TCAAATGGCT GATGTTGGGG TAGGGATAAG CGGCCAAGAA GGTCGCCAAG CTGTGATGGC ATCTGATTTC GCAATGGGAC AGTTCAGATT CTTAGTTCCG CTATTGCTCG TCCATGGACA CTGGAATTAC CAAAGGATGG GTTACATGAT ACTATATAAT TTCTATAGAA ATGCAGTTTT TGTTCTAATT TTATTTTGGT ACGTTTTGTT TACTTGCTAC ACCTTGACAA CCGCCATCAC AGAATGGAGC AGTGTTTTGT ACTCAGTCAT ATACACAGCA GTCCCTACAA TAATTATCGG TATTCTTGAC AAAGACCTTG GAAGGAGGAC TCTTCTAGAT CATCCTCAGC TCTACGGTGT TGGCCAGAGG GCAGAGGGAT ATTCCACTAC GCTCTTTTGG TATACAATGA TTGACACAAT CTGGCAAAGT GCAGCAATCT TCTTCATTCC TATGTTTGCT TATTGGGGCA GTACAATTGA CACGTCGAGC CTAGGAGACC TATGGACCAT TGCTGCAGTT GTGGTGGTTA ATCTTCACTT GGCCATGGAT GTAATTAGAT GGAACTGGAT CACACACGCC GCCATATGGG GATCCATTGT TGCAGCTTGT ATATGTGTCA TTGTGATCGA TGTTATACCC ACACTCCCTG GTTACTGGGC AATTTTCCAA GTGGCCAAGA CGTGGATGTT CTGGTTCTGC TTGCTTGCCA TTGTTGTGAC AGCATTGCTT CCTAGATTCG CCATCAAGTT TCTTGTCGAG TATTACAGAC CTTCCGATGT TCGGATTGCT AGGGAGGCTG AAAAGCTTGG AACTTTCAGA GAATCCCAAC CCCTGGGAGT TGAAATGAAC CTGATTCAGG ATCCTCCAAG GAGATGATAG GAAACAACAA CACATTCT
Length3528
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G04930.1
Descriptionaminophospholipid ATPase 1
TAIR curator summaryEncodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response.
Alias[ALA1][aminophospholipid ATPase 1]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg928898 syntaxin of plants 121
8.94427 Ahg924051 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
8.94427 Ahg496189 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
10.6771 Ahg476205 Protein kinase superfamily protein
10.6771 Ahg480914 Major facilitator superfamily protein
11.4018 Ahg479119 Protein phosphatase 2C family protein
11.7473 Ahg947531
12.1244 Ahg486111 sigma factor binding protein 1
12.49 Ahg496698 Ras-related small GTP-binding family protein
14.8661 Ahg475208 LisH and RanBPM domains containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression