Detail



ID : Ahg939904

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939904|scaffold_600448.1
Sequence
TGTGTAGTCA AACCAGATCA AATGTCGGCA TCAACGGTGT CGATCACCGC TAATACGGCG GCGGCGACTA GACGGACGCC GATTCTTTCC GGAGAGAAAA AATCAAACTT TGATTACCCG CAAAGCGAAT CGCTTGCGAA CGGTGGTGGT GTTGGGGAAG CCGGTGGTAC GAGCAGAGAT CTGAGCCGCG GTGAGGCTAT CGTTGATCGC TCTCACGGTC AAGATTTGGG TCCTGTGACG AGGAGGTCTG GTTCCGCTGC GACGGGGACT AATACCACCA CCACGCAGCG CCGTACGCGG AAGGTTGCGA CTCCTAAGCC TGAGAAAGCG CGGTGGAAGA CAGTGGTGAG GATATTCGCA AAGCAGCTTG GGGCACTTTT GATCATTGTT GGGTTAATTC AATTGACGAG GAAGATGATT CTCAAGGCTT CGTCTCCGTC CTCTCCGATT TCTTCTTATG AAACGGGGAT GGCGTTTTCG GGATTAGAAA GCCGAATTGC GGAAGTTGAT GGTCTTGTTA AGGCCACGAC GAGTACGATG CAGGTTCAAG TTGAATTACT TGATAAGAAG ATGGAGAGGG AAGCAAAAAC GCTGAGGCAA GAAATCGAGA GGAAAGCTTC TGTATTTCAG AGTGAGTTGA AGAAGATAGA ATCTAGAACT GAGTCACTAG AGAAGTCTGT AGATGAAGTA AATGCTAAAT CTTGGGTGAC GAAAGATGAG TTAGAGAGGA TTTATGAGGA ACTGAAGAAG GGTAATGTCG ATGATTCTGC TTTTAGTGAG ATTAGCATTG ATGAATTGAG GGCTTATGCT CGTGACATTG TGGAGAAAGA GATTGAGAAA CATGCTGCAG ATGGCCTTGG CCGAGTTGAT TATGCATTGG CTTCTGGTGG TGCTTTTGTG ATGCAGCATT CAGATCCTTA TCTTGTTGGA AAAGGGAGTA GCTGGTTTGC GACTACCATG CGACGCGCTC ATACCAATGC GGTTAAGATG TTATCTCCGA GTTTTGGGGA GCCTGGACAG TGTTTTCCTC TGAAAGGTAG TGATGGCTAT GTGCAAATCA GGCTGAGAGG ACCAATCATA CCAGAGGCTT TCACATTGGA GCATGTAGCT AAGAGTGTAG CTTACGACAG ATCGAGTGCT CCAAAAGATT GCCGTGTATC AGGATGGCTG CAAGGACAAG GAAAAGGACT GGAATCCTCA GCGGAGAATG AGAACATGCA ACTTCTAACA GAGTTCACTT ACGACCTAGA CAGGTCGAAC GCACAAACAT TCAACATCTT AGACACATCA AACTCTGGTC CAATCGATAC TGTCAGGCTA GATTTCACCT CCAACCATGG AAGCGACTCG CACACTTGCA TCTACCGGTT CAGGGTTCAC GGGCGTGCAT CAGACCCGGT CCCTGTTGTG GAAACGAGTC TTGATCAGGA CTCTTCACCT GGAAGTGAAT AAACAAACAT CTTCTGTATT GTA 
Length1473
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1686746.. 1688784
Download Sequence
A.thaliana
AGI-codeAT5G04990.1
DescriptionSAD1/UNC-84 domain protein 1
TAIR curator summaryEncodes a member of the Sad1/UNC-84 (SUN)-domain proteins: AtSUN1(At5g04990), AtSUN2(AT3G10730). SUN domain proteins are part of the cytoskeletal-nucleoskeletal bridging complexes. AtSUN1 and AtSUN2 are localized to the nuclear envelope and are present as homomers and heteromers in vivo.
Alias[ATSUN1][SUN1][ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 1][SAD1/UNC-84 domain protein 1]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg930446 RNA recognition motif (RRM)-containing protein
14.1421 Ahg928634 RAB geranylgeranyl transferase alpha subunit 2
14.6969 Ahg925609 IBR domain-containing protein
16.4317 Ahg928450 Kinase-related protein of unknown function (DUF1296)
20.7364 Ahg471074 Cysteine proteinases superfamily protein
25.9037 Ahg950049 Polyketide cyclase/dehydrase and lipid transport superfamily protein
28.2843 Ahg940448 nuclear matrix protein-related
29.6985 Ahg311783 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
32.619 Ahg485406 Transducin/WD40 repeat-like superfamily protein
36.1663 Ahg947489 Lung seven transmembrane receptor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression