Detail



ID : Ahg939954

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939954|scaffold_600498.1
Sequence
GCCAGATTCA CGGCGATATC CGATGCCTAA AGAGCCGGTT CGGTGGGTTC CTCTCCAGAG CCACCCGGTT TTCGCTTCTC TTCCATCCTC CCAGGATGAA CTCGCCGCGT CGCAGCGTTT TCCGAGAAAT TTGATGGCTT GGGACGGAGA CTGGCGCCTA TACTACTGGG ATTCTAAACG ATATCTCCTT CACCGATTAT CTCTGCGCTT GGGTGAGCCT GAACCATCAT CCGTCCTCGC CGCAGTCCCG TCCAAGGTGA TGCAACCAGA CCTTCAACTG ACATTTTCTG TTAGCAAAAT CTCCATTAAT AAGTCTGGAT CAGCTGTACT TCTTGCCGGC TCAGATGGAA TATGTGTGAT GTACCTATTT GGACGTGCTT CTGTGGTAGA ATACAATATC ATTTGCAGGG TAGTTTCTAT TGGTTCAGAA ATCTATACTA GTGGTGACAA TGCCATAAAC TTGCTACAAG CATTGTGGCA CCCTGATAGT GACACCCATT TGGAAATTCT ATCCTCGGAT GCAGTTTTCA GCTTTGAGGA TTACATGTTT ATGTCTTCAC CAAATCTTTC AATGGTGCAG TTCTTTATAT TATTCACTGA TGGTTCAATT TATATCCTGT GCCCAGTTGT GCCATTTGGA AGATTTACAA CGATGCAAGG AACTAGAGGT GAAAATATAT TGGTGGTGAA AGCTCATCCT TATGCTTTGC TTGACGCATC ATTGGCTTTA CAGGGCCCTT TATATAAAGC ATCTAGTGGC GACGGAGATG AAGATTTCGC TGTTCGGGAG GCAGAATGTA AAGGCCGGGC AGTGAGTCTA TCATATAATC TTGTCAGCAA AGATTCGATT CTGGTAACTG CCTGGAGTGC AGGATCTTAC GGCTCCACTA GTATTGGCAG AGTAACTAGG AAACCAAAAC ACACTCACTG CCACTGGTGA ACGCTTAAAC ATCTTTTCAA G 
Length961
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1859590.. 1862370
Download Sequence
A.thaliana
AGI-codeAT5G05680.1
Descriptionnuclear pore complex protein-related
TAIR curator summaryEncodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.
Alias[EMB2789][MOS7][EMBRYO DEFECTIVE 2789][MODIFIER OF SNC1,7]
Gene coexpression
MR
MR Locus Description
1.73205 Virus1737
2.44949 Ahg923562 Membrane trafficking VPS53 family protein
2.64575 Ahg938949
5.47723 Ahg947031
12.0416 Ahg896238 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
14.8324 Ahg939732
16.4924 Virus1991
18.9737 Ahg476015 basic leucine-zipper 8
19.3907 Ahg931279
20.199 Ahg894787
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression