Detail



ID : Ahg923562

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923562|scaffold_104843.1
Sequence
TATGTAATCA TTTCGAAGCA TACATGGATG TTCCTAAAAT TATGGAGCTC AGAGAAAAAA TTAAGAATAT AAAACAAATT TTAAAGTCCC ATGTATTTTC TGATTTTTCC AGCTTAGGTA CTGGGACAAA GACAGAGGAA ATTTTTTTGC TAAAGAATTT ATCTGATTCT TGCTTGGTTA TTGATGCTCC GGGGCCATCT GTGAGGGAAG AGTTGGTAAA CAACTTTTGC AGCAGGGAGC TCACCTCATA TGAACAAATT TATGTAGGAG CTGAGCGGAT ATACAATCGG TTAAATTGTC TAATTCGAAC AAATCAAGAA AAATGGACGA TTTTTCCTGC TTCATGGCAT GTGCCTTATA GACTATGCAT CCAGTTGTGC AACAAAACAA GGGTGCAAGT AGAATCTATT CTAGTCAACC TGAAAGAGAA GCCAGATGTA GAAAAATTGC TTCTGGAACT GAAAAGGACG CTAGAGTTTG AAATGGAACT TGAAATGAAA TTTGTTGGTG GTGGGAGTTT CGGAGATGAC ACTAAGGAAA TTGGTGGAGG GGGAAATAAT AGTCAGAAAG TGGAGGAAAT ATGGGATATT GAAGAGGAAA GTCAAACTAA TATTCTATCT AGCAGCATAC TGTTGTTTTT CACTATAAAA AAGAGCTTGA AACGTTGTAG TGCTCTCACC AAGAACCAGA CTTTATTCAA TTTGTTCAAG GTCTTTCAAC GAGTTCTGAA AGCCTATGCA ACAAAGCTAT GTTTTAAGCT CCCAAAAGGA GGCACCAGTA TCATTGCCGC AGCCACAGGC ATGGAGGGTC GGATAAAGGT CTCGGACAAA GATGAAAGGA TGATATGTTA CATAGTTAAT ACTGCAGAGT ATTGTCACAA AACATCTGGT GATCTGGCAG AAGAAGTCTC AACAATTATT GACCCGCCTT ATGCTGACGG TGTAGACATA TCAGAGGTCC AGCTGGCATT ATCCCTTGGA CCAAGGTTCT ATGCTAATAT TTTCAGATGC AAGCAAATAT CAGAAACTGG AGCTCACCAG ATGTTGCTAG ATGCGCACGA TATGAAGATG ATAGTTTTAA AAGTTCCATC TCTTGCCAGA CAGACTCCAA CTGCGAGCTA TGTCGAATTT GTGAACCATC AAATGAAAAG AGCTGAAGCA GTCCTAAAGG TCATAACATC CCCAATCGTC TCAGTGGTAG ACACTTATTG TGCACTGTTT CCAGAAGGAA CACCAATGGA GTTTCAACGC ATCTTGGAAC TTAAGCTGAG CAGAAGAGTA TACTTGATGA TTTCAACAAT CCTGGTTGCA GCGGCAATGC CAGAAGCACC TGCACCGCCA CTGGCAGTCG CTAATCCGGG TGCAGCTGTT GGGTTCATAG CAAACAGTGA GGAAGTGTTA ACCACAGCCG CTGAAGCTGC AACCACTAGC TTCATGAAGT TATATTCTGT TACTGAAACG GCCAAAGACC GTCCCTTCAG GAAACTCTTC AATGCATGAA TTTGTAAATT TTACAGAGC 
Length1519
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25587510.. 25592220
Download Sequence
A.thaliana
AGI-codeAT1G50970.1
DescriptionMembrane trafficking VPS53 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Virus1737
2 Ahg947031
2.44949 Ahg939954 nuclear pore complex protein-related
2.82843 Ahg476015 basic leucine-zipper 8
4.89898 Ahg944631 Transcriptional factor B3 family protein
5 Ahg939732
6.48074 Virus0713
7.48331 Ahg487469
7.93725 Ahg891934
13.4164 Ahg944785
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression