Detail



ID : Ahg940295

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940295|scaffold_600839.1
Sequence
ACATAACGAA CCCTAATTCC ATGGCCAACA ACGACGGAGC AGTGACTAAC GGCGTCATAA TCGAGCAGAC GTCAAACAAA GGACCTCTTA ACGCCGTTAA GAAACCACCG TCTAAAGATC GACACAGCAA AGTTGACGGA AGAGGAAGAA GGATTCGTAT GCCAATCATT TGCGCAGCTC GAGTTTTCCA ATTGACCAGA GAGTTAGGTC ACAAGTCCGA TGGTCAAACC ATAGAGTGGC TTCTCCGTCA AGCTGAGCCT TCTATCATAG CCGCCACTGG AACTGGCACT ACTCCGGCAA GTTTCTCCAC TGCTTCTCTT TCCACTTCTT CTCCGTTTAC ACTCGGAAAA CGTGTCTTCA GAGCGGAGGA AGGAGAATCC GGCGGCGGCG GCGGAGGAGG AGGGTTAACA GTGGGACACA CAATGGGGAC TTCGTTAATG GGTGGTGGTG GTTCTGGTGG GTTTTGGGCT GTTCCGGCGA GGCCTGATTT CGGACAAGTC TGGAGCTTTG CAGCCGGAGC TCCACCGGAG ATGGTTTTTG CTCAGCAGCA GCAACCAGCT ACACTCTTTG TCCGCCACCA GCAGCAACAG CAAGCTTCCG CCGCCGCAGC CGCTGCAATG GGTGAGGCTT CAGCAGCTAG AGTTGGGAAT TATCTTCCGG GCCATCATCT CAATTTGCTT GCTTCTTTGT CTGGTGGAGC TAACGGGTCG GGTCGGAGGG AAGACGACCA CGACCCACGT TGAGAAAAAA GGTTTTGTCT TTTT 
Length764
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3137316.. 3138079
Download Sequence
A.thaliana
AGI-codeAT5G08330.1
DescriptionTCP family transcription factor
TAIR curator summary
Alias[AtTCP11][TCP11][TCP domain protein 11]
Gene coexpression
MR
MR Locus Description
7.87401 Ahg486262 Basic-leucine zipper (bZIP) transcription factor family protein
18.3303 Ahg331018 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
18.7083 Ahg943148 Cupredoxin superfamily protein
18.735 Ahg948737 HAD superfamily, subfamily IIIB acid phosphatase
20.4939 Ahg476133 glucosyl transferase family 8
23.1517 Ahg934076 tubulin beta-9 chain
27.5681 Ahg941021 early nodulin-like protein 17
29.7489 Ahg495136 Heavy metal transport/detoxification superfamily protein
30.1993 Ahg486504 Protein of unknown function (DUF630 and DUF632)
32.8634 Ahg926846 Gibberellin-regulated family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression