Detail



ID : Ahg940650

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940650|scaffold_601194.1
Sequence
CGCCTGTGGG TCATGCGATC ATGGTGGCTG CTACTGATTG TCCTAACAAA TTCAAATCCA TAGGAGACAA ATTCGCCCAG CTTTTATTCT CCTGCAGAGT GGGTCGTTGC ATCGGATGCG ACCATCTTGA ATTGTCTGTT CCCGGAGACG ACGAGGCTAA TCGCGGCCGT GGAACCACCG GTGACGGCGG TGGTGGTACG GCGGTTGATG AAGATTATGA GGTTGGTGGT AGTAAAGAGA GCAAAGATGA TAAATTCATA GATTCACCGG AGAGCAAAAT GTCGTATGGA AAAGAGGCAC ACGATGAGCT ACTCAATATG GTTGAAGGGA AATGCTTGAA GATGTTAGTT TATACAGAGG ATCGTTATGG AAGACGTGTA GGAGATATAT ACTGCAATGG AAAATTTGTA CAGGAAGTAA TGCTAAAGAA AGGTCTTGTC TGGCATTATG TAGCCTACGA CAAGTGTATA TGTATGTCCC CATATTAATA TCAATGAGCT GTGTTATA 
Length508
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT3G56170.1
DescriptionCa-2+ dependent nuclease
TAIR curator summaryEncodes a calcium-dependent nuclease with similarity to staphylococcal nuclease.
Alias[CAN][CAN1][Ca-2+ dependent nuclease][calcium dependent nuclease 1]
Gene coexpression
MR
MR Locus Description
12.4097 Ahg949588
21.587 Ahg492343
31.9844 Ahg912127
32.1714 Ahg897453 Leucine-rich repeat protein kinase family protein
33.4664 Virus3888
36.4006 Ahg940077
38.7427 Virus3808
39.2428 Ahg938456 Plant self-incompatibility protein S1 family
45.6946 Virus3877
55.7494 Ahg919650
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression