Detail


ID : Ahg940758

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940758|scaffold_601302.1
Sequence
AAGACAAACG AGTATAGATA CGATGAAGTC TGGTCTCATT ATAACCATTG CTTTATTATT ATACACAAGC TTTGTTCTTG TTTGTGTAGC GAAAGAGTGT ACGAACACTC CTACGCAGCT CTCATCGCAT ACTTTCCGCA ACGAGCTTCT TCAATCAAAG AACGAAACTT TGAAGACAGA GTTGTTCTCT CATTACCATT TAACACCAAC TGATGACGCT GCTTGGTCTA CTTTGTTGCC AAGGAAGATG TTGAAAGAAG AGGCTGATGA ATTTGCTTGG ACTATGTTGT ATAGGACGTT CAAGGACTCT AATTCCTCTG GTAACTTTCT TAAAGAAGTC TCTTTGCACC ACGTTAGGCT GGATCCAAAC TCCATTCATT GGAGGGCTCA GCAGACAAAC CTTGAGTATC TATTGATGTT GGATGTTGAT GGTTTGGCCT GGAGCTTCCG TAAAGAAGCT GGTCTTGATG CTCCTGGAGA TCACTATGGA GGATGGGAGA AACCAGATAG TGAACTCCGT GGCCATTTTG TCGGTCACTA TTTGAGTGCA ACAGCTTATA TGTGGGCAAG TACTCATAAT GATACTCTCA AGGAGAAAAT GTCAGCTCTT GTCTCAGCTC TATCGGAATG TCAGCAGAAA TCTGGCACAG GATATCTCTC TGCTTTTCCT TCCAGTTTTT TCGACCGGTT TGAAGCTATA ACACCTGTTT GGGCTCCTTA CTACACCATT CACAAGATTA TAGCTGGTCT GGTTGATCAA TACAAGTTGG CTGGGAACAG TCAAGCTTTA CAGATGGCAA CAGGGATGGC TGATTACTTC TATGGCCTTG TTCGTAATGT GATAAGGAAG TACAGCGTTG AAAGACATTG GCAATCACTA AACGAAGAGA CTGGTGGCAT GAATGATGTT CTCTATCAGC TATACAGCAT CACTGGAGAC TCCAAGTATT TGCTGCTCGC ACATCTCTTT GACAAGCCTT GCTTTCTTGG AGTCCTCGCA ATTCAGGCCG ATGATATAAG TGGATTCCAC TCTAACACAC ATATTCCCAT CGTCGTTGGA TCCCAACAAC GGTATGAAAT CACTGGTGAT CCACTCCATA AGGAAATCTC GATTTTCTTT ATGGACATCG TTAATGCTTC TCACAGCTAT GCAACTGGAG GAACATCAGT CAGTGAGTTC TGGCAAAATC CAAAGAGAAT GGCGACTACG CTGCAAACTG AAAACGAGGA ATCATGTACT ACTTATAACA TGCTCAAGGT CTCTAGGAAT CTGTTCAGAT GGACAAAAGA GGTTAGCTAT GCAGACTATT ACGAGCGTGC TTTGACCAAC GGTGTGCTCG GAATTCAAAG AGGAACCCAA CCTGGACTGA TGATCTACAT GCTCCCATTA GGTAAAGGTG TTTCTAAGGC TGTGACTTAT CACGGTTGGG GAACACCTTA TGATTCCTTC TGGTGTTGCT ATGGCACTGG AATTGAATCT TTCTCAAAAC TGGGAGATTC CATTTATTTT CAAGAAGATG ATGTATCTCC AGCTCTTTAT GTCACCCAAT ATATATCAAG CTCACTTGAT TGGAAATCTG CTGGTCTTTC GCTATCTCAG AAAGTTAATC CCGTTGTATC GTGGGATCCG TACATGCGTG TGACATTCTC TTTCTCTTCT TCCAAAGGGG GAATGGCAAA GGAGTCGACT TTGAATCTAA GAATTCCAGT TTGGACAAAC TCTGTAGGTG CCAAAATATC TTTGAATGGG CAATCCTTAA AAGTACCAAA CTTCAGAACC CGTAATTTCC TATCAATCAA ACAGAACTGG AAATCTGGCG ATCAAGTAAC CATGGAGTTA CCATTGAGTA TCAGAACCGA AGCTATAAAA GATGATCGGC AGGAGTACTC ATCTCTTCAA GCCATACTCT ATGGCCCCTA CTTGTTAGCC GGACACACGA GCAGGGACTG GAGCATCACA ACTCAGGCTA AAGCTGGAAA ATGGATAACC CCTATACCTG AAACTCAAAA CAGTTACCTT GTCACACTCT CACAACAATC TGGAAACATA TCTTACGTGT TTTCAAATAG CAACCAAACC ATCACAATGA GAGTATCACC CGAGCCAGGG ACACAAGATG CCGTTGCAGC GACTTTCAGG CTCGTGACTG ATAATTCTAA ACCACGGATA TCGGGTCCAG AGGGACTAAT TGGAAGCCTG GTCAAGCTTG AGCCGTTTGA TTTCCCCGGC ATGATTGTAA AGCAAGCAAC TGATAGCTCC CTCACGGTTC AAGCTTCTTC TCCTAGTGAC AAAGGAGCTT CTAGCTTTCG GTTAGTATCT GGAGTTGATG GGAAGCCAGG AAGCGTGTCG TTAAGACTAG AGAGCAAAAA GGGTTGTTTT GTGTACAGCG ATCAAACACT AAAGCAGGGG ACGAAACTAA GGCTTGAATG TGGTTCGGCT GCGACTGATG AGAAGTTTAA ACAGGCAGCA AGCTTTAAGT TAAAGACAGG AATGAATCAA TACAATCCAA TGAGTTTCGT GATGAGCGGA ACACAGAGGA ACTTTGTGTT ATCGCCATTG TTTAGCTTAA GAGATGAAAC ATACAATGTG TACTTCAGTG TGCAAACTTG AAGAAAGAAA CCCTCTTAAA ATTCTTT
Length2637
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4972943.. 4981132
Download Sequence
A.thaliana
AGI-codeAT5G12950.1
DescriptionPutative glycosyl hydrolase of unknown function (DUF1680)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg488069 Putative glycosyl hydrolase of unknown function (DUF1680)
4.58258 Ahg490494 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
6.16441 Ahg931869 Protein kinase superfamily protein
10 Ahg484841 NIMA (never in mitosis, gene A)-related 6
10.583 Ahg482617 Family of unknown function (DUF662)
11.4018 Ahg333040 serine carboxypeptidase-like 20
11.4891 Ahg932754 Leucine-rich receptor-like protein kinase family protein
13.9642 Ahg349957 FASCICLIN-like arabinogalactan protein 21 precursor
20.7846 Ahg484593 nodulin MtN21 /EamA-like transporter family protein
21.2132 Ahg941395 tubby like protein 11
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression