| Annotation |
|---|
| Description | jgi|Araly1|484841|fgenesh2_kg.5__833__AT3G44200.1 |
| Sequence |
ACTCTGCAAC AAGTGAACTA AACACAGAAG AAGAAGAAGA AGAAGAAGAA GACGAGACGA CGAATCCAGA AATAGAGAGA CCTTTGAATA TCTTCTTTGT ACACAATCTT CTTCGCATGG AAGGTTTATC CAAAAATGTC TGGATCCGAT TTTGATTTCG CGGCGTTTCG AGTTCAATGC TAAACCATCG AGCGGTTTCG AATCTCTAGG AATCGAAGGA AAACGAAGCG TGTAGGTTAG GGAAATTAAG ATTACGTTGA AGAGAAGCAA GTTTCTCTTA AATCGCAACT TTTTGGTAAA GCGATGGAGT CACGAATGGA TCAGTATGAG CTTATGGAAC AGATCGGGAG AGGAGCGTTT GGTGCTGCTA TTTTAGTTCA TCATAAAGCT GAGAGAAAGA AGTATGTTTT GAAGAAGATC AGATTAGCTA GGCAAACGGA ACGTTGCCGG AGATCTGCTC ATCAAGAGAT GTCTTTGATT GCGAGAGTTC AACATCCTTA TATTGTGGAG TTTAAAGAAG CTTGGGTTGA GAAAGGTTGC TATGTTTGTA TTGTCACTGG ATACTGTGAA GGAGGAGACA GGGCTGAGTT GATGAAAAAG TCAAATGGTG TTTATTTTCC TGAGGAGAAA CTTTGCAAGT GGTTTACTCA ATTATTATTA GCTGTTGAGT ATCTGCATTC TAACTATGTT CTACATCGTG ATCTAAAGTG TTCCAACATT TTCCTTACAA AAGATCAAGA CGTCCGCCGT GGGGACTTTG GGCTTGCCAA AACATTGAAG GCGGATGACC TAACTTCCTC GGTTGTTGGA ACTCCAAACT ACATGTGCCC TGAACTGCTT GCTGATATCC CTTATGGTTT TAAGTCTGAT ATCTGGTCAC TTGGCTGTTG TATATATGAG ATGGCTGCGT ATCGGCCTGC TTTCAAAGCT TTTGATATGG CAGGGCTTAT AAGCAAGGTT AATCGCTCCT CAATTGGTCC GTTGCCTCCG TGCTATTCAC CATCTTTAAA AGCACTCATC AAGGGAATGT TAAGGAAGAA CCCCGAGTAT CGGCCAAACG CCTCCGAGAT TTTGAAGCAT CCTTATTTGC AGCCATATGT AGAGCAGTAC CGTCCAGCCC TGTCTGCAGC GTCTATAACT CCAGAAAAGC CTCTCAATTC TCGCGAGGGT CGGAGGAGTA TGGCTGAAAG TCAGAACAGC AATAGTTCAA GTGAAAAAGA TAACTTCTAC GTGAGTGAAA AAAATATCCG ATATGTGGTT CCAAGTAATG GTAATAAAGT CACTGAGACC GATTCAGGTT TTATCGATGA TGAAGACATC CTTGACCATG TGCAACAATC AGCTGAAAAT GGTAATCTCC AGAGCGTTTC AGCAACAAAA CCAGATAGCC ATGGGATTTT AAAGCCCGTA CACAGTGACC ATCGACCAGA CGTTATTCAA CCAAGGCACC CAAAAACTAT CAGAAACATC ATGATGGTTT TGAAAGAAGA GAAAGCTCGA GAAAATGGTT CACCCATGAG ATCTAATCGA AGTAGACCTT CTAGTGTTCC GACACAGAAG AATAATATTG AAACTCCATC AAAGATTCCC AAACTCGGTG ACATTGCTCA TAGCTCCAAG ACTAACGCAA ATATGCCTAT TCCACCATCA AAGCTGGCCT CTGATTCCGC AAGGACACCA GGATCATTTC CACCGAAGCA TCACATGCCA ATGATTGACT CTTCTCCAAA ACTTAAGCCT AGAAATGACA GAATTTCACC TTCTCCTGCT GCTAAACATG AGGCTGAAGA GGCAATGTCA GTTAAGCGTA GGCAAAGAAC ACCTCCTACT TTGCCAAGAA GAACGTCTTT GATAGCGCAC CAGTCTAGAC AATTAGGAGC AGATATTCCA AATATGGCAG CCAAGGAAAC CGCGAAGCTA CATCCATCTG TGCCATCAGA GTCTGAAACT AATTCTCATC AATCTCGTGT CCATGCTTCT CCTGTGAGTA CGACGCTGGA GCCAAAGAGA ACCTCTGTTG GATCTTCCAA AGGAATGCAG AGTGAAAGCA GCAATTCTAT CTCATCGTCG TTGTCCATGC AGGCATTTGA GCTCTGTGAT GATGCTTCCA CCCCATATGT CGACATGACA GCACATACAA CTCCTGATGA CCACAGAAGA TCCTGTCACA GTGAATACTC GTATTCATTT CCAGATATCT CCTCAGAGAT GATGATCCGC AGAGAAGAAC ACAGAACCAG TATGCGGCTG ACTGAAATTC CCGACTCTGT TTCTGGTGTT CAAAACACCA TTGCCCATCA TCAGCCGGAA GGAGAGCAAG GAAGCTCTCC CATTGTGCCC AAAGATGATA GCCCTACCAC ATTACAGAGC TACGAGCCTA ACGCATCACA ACGACAACAT GGTGATGACA AATTCACAGT CAAAGAATTC GTCTCCTCTG TTCCCGGAGC CGCACCAATG CCTTTGCATG TTGAACCATC CCACCAAGTG AATTCCCACT CGGATAACAA AACAAGCGTA GTGTCTCAGA ACTCAGCTCT TGAGAAGAAC AACAACCCTT CCCATCTTCA TCCTGTGGTT GATGATGTCA TACATGTTAT CCGTCACAGC AGTTTCCGGG TAGGGAGCGA CCAGCCGGTC ATGGAAAGTG TTGAAGTCGG TGTCCAGAAC GTCGACATGG GGAAACTCAT AAACGTGGTG AGAGATGAAA TGGAAGTGAG AAAAGTAGCC ACTCCCTCTG AATCACCCAC CACGAGATCA ATCATCTCAG AGCCTGACTC AAGAACCGAG CCCCGTCCTG AAGAACCTGA CCCCATCACC AATTACTCAG AAACAAAGAG CTTTAACTCC TGCTCTGATT CTTCACCAGC TGAGACAAGA TCTAACTCAT TCGTGCCTGA AGAGGAAACA ACTCCGACTC CACCTGTGAA AGAGACGTTG GACATCAAGT CGTTCAGACA GAGAGCAGAG GCGCTTGAAG GTTTATTGGA ACTATCTGCG GATTTGCTGG AACAGAGCAG GCTCGAAGAG TTAGCCATCG TGTTGCAGCC GTTTGGGAAG AACAAAGTTT CGCCTAGAGA AACCGCTATT TGGTTGGCAA AGAGTTTGAA AGGAATGATG ATCGAAGACA TCAATAATAA TAATAGCAGT GGAAGCTCAA GGAATTGTTC ATGAAGGTAA ATTATCATAC AAGCATTTTC AACCAAACTC TAGTGTTACA TTTTTTTTCT CTAAAACGTT TATATTGTCA TAAAATAACA ATTCTTTCAT TA |
| Length | 3272 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 10205633.. 10210794 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G44200.1 |
| Description | NIMA (never in mitosis, gene A)-related 6 |
| TAIR curator summary | Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules. |
| Alias | [ATNEK6][IBO1][NEK6][NIMA-RELATED KINASE6]["NIMA (never in mitosis, gene A)-related 6"] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg316920 | RING/U-box superfamily protein |
| 7.74597 |
Ahg485469 | ATP binding microtubule motor family protein |
| 10 |
Ahg940758 | Putative glycosyl hydrolase of unknown function (DUF1680) |
| 12.8452 |
Ahg472118 | DDT domain superfamily |
| 15.2971 |
Ahg337635 | Nuclear pore complex protein |
| 16.3095 |
Ahg473716 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 18.5472 |
Ahg497310 | DNA/RNA-binding protein Kin17, conserved region |
| 19.7484 |
Ahg948606 | chromatin remodeling 4 |
| 25.4951 |
Ahg324008 | Zinc finger (C3HC4-type RING finger) family protein |
| 27.55 |
Ahg471133 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|