Detail



ID : Ahg940784

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940784|scaffold_601328.1
Sequence
TCTCTCTCCT TTTGTTTGGA ACCATGGATA ATGTTAAACT TGTTAAGAAT GGTGTTTTGA GATTGCCACC TGGATTCAGA TTTCATCCTA CTGATGAAGA ACTTGTTGTT CAATACCTTA AGAGGAAAGT CTGTTCTTCT CCTTTGCCAG CTTCAATCAT CCCTGAGTTT GATGTTTGCA GAGCTGATCC TTGGGATTTA CCTGGCAATT TGGAGAAGGA GAGGTACTTC TTTAGCACAA GGGAAGCTAA GTACCCAAAT GGGAACCGGT CTAACCGGGC AACTGGGTCT GGTTATTGGA AAGCTACCGG TATTGATAAA CGGGTTGTGA CCTCTAGAGG AAATCAAATC GTTGGTTTGA AGAAAACTCT TGTCTTCTAC AAGGGCAAAC CACCTCATGG CTCAAGAACC GATTGGATCA TGCACGAATA TCGCCTCTCT TCTTCTCCTC CGAGTTCTAT GGGTCCCACT CAGAACTGGG TTCTCTGTCG TATCTTCTTG AAGAAAAGAG CCGGAAACAA GAACGACGAC GACGACGGAG ATAGCCGGAA TCTTAGACAT ATTAATAATA ATAATTCGAG TGACCAAATT GATATAATTA CAACAAACCA AACAGATGAT AAAACAAAAC CAATCTTCTT CGATTTCATG AGAAAAGAAA GGACTACAGA TTTGAACCTT TTGCCTAGCT CCCCTTCTTC CGATCATGCT TCAAGTGGAG TCACGACGGA GATCTTCTCT TCTTCCGATG AAGAGACCAG TAGTTGCAAT AGTTTCAGAA GAAATCTTTA ATTTAATTTT CATGTTGACT AT 
Length812
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5101650.. 5102628
Download Sequence
A.thaliana
AGI-codeAT5G13180.1
DescriptionNAC domain containing protein 83
TAIR curator summaryEncodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.
Alias[ANAC083][NAC083][VNI2][NAC domain containing protein 83][VND-interacting 2]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg476949 Translation initiation factor IF2/IF5
8.24621 Ahg478222 mRNA capping enzyme family protein
14.5602 Ahg481429 Protein kinase family protein
15.5885 Ahg922113 root FNR 2
19.3391 Ahg477742 indoleacetic acid-induced protein 16
19.4422 Ahg471678 Plant invertase/pectin methylesterase inhibitor superfamily protein
31.7805 Ahg924045 calpain-type cysteine protease family
36.3318 Ahg479179 sequence-specific DNA binding transcription factors
36.8782 Ahg478681 CBS domain-containing protein / transporter associated domain-containing protein
37.229 Ahg486623 brassinosteroid-responsive RING-H2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression