Detail



ID : Ahg940818

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940818|scaffold_601362.1
Sequence
CAAGCTTTTC TCACTCAGCA ATGGCACCCA TTGATCCACA CTCTTTCACC GATTCCTCTC ATCCTCTCAC CACGCATCTC GCTCTCTCCC TTTACCTCGA TTTCAACACC TCCATCATCC ATGGCTCCGC TCTCCTCACT CTCTCCTCCG CCTTCTCCGG CGAACTCTCT CTTGATACTC GCTGCATTTC CATCCATATG TTCCTCGATC CTCTAACTCT CGATCCCCTC CCTTACCGCG TCTCCACCAC GCCGGATCGA ATTCGAGGCA CCGAAGTTGT CGTAGTCCTC TCCGGTCAAT CTTCGCTGTT AATCGTCTAC TCCACTTCGC CTTCCGCCTC CGCTCTCCAG TGGCTATCTC CGCTTCAAAC CTTCTCCAAA TTGCATCCCT ATGTCTACAC GCAGTGCCAG GCGATCCACG CCAGATCCAT TTTCCCATGC CAGGACACTC CTGCCGCGAG GATTCGCTAC GATGTCGTCA TGAACATACC GAATTCGCTC TCTGCCGTCA TGTCAGCTCG CCACGTCCGT CGTAGGCTGG CGGTTCCTGA GGAGGCTAAA CATCTCGAGG CGGGGTCGCT GGGTCCGTCA CTGTGGTGTG GTGAGGATAG AGTTGTGGAA GAGTTTGCTA TGGAACAGCC TATACCGCCT TATCTATTTG CGTTCGCCGT AGGTGAGTTA GGGTTTCGGG AAGTTGGACC TAGGACTCGG GTATACACAG AATCTGCCGC CGTTGAAGTT CTAGATGCGG CGGCTCTGGA GTTTGCAGGA ACGGAGGATA TGATCAAGCA AGGGGAGAAG CTGTTTGGAG ATTACGAGTG GGAGAGATTT GACTTACTGG TGCTGCCTCC GAGTTTTCCT TATGGAGGGA TGGAGAATCC AAGAATGGTT TTCCTGACGC CTACTGTAAT CAAAGGAGAC GCCACTGGAG CTCAAGTTGT AGCTCACGAG CTCGCACATA GCTGGACTGG GAATTTGATC ACTAACATCA ACAACGAACA TTTCTGGTTG AATGAGGGAT TTACAACTTA CGCAGAGAGG AGAATTGTGG AAGTTGTTCA AGGCCCGGAT AGAGCTACTC TGAACATTGG CATTGGTTGG AGGGGTTTAA CTGATGAAAT GGAACGGTTT AAGGACAACT TGGAGTGCAC TAAACTGTGG AACAAACAAG AAGGTGTTGA TCCAGATGAT GTGTATTCTC AGGTCCCATA TGAAAAAGGA TTCCAATTTG TGTTGCGAAT TGAACGCCAG ATTGGAAGGA CTGCGTTTGA CGAATTCCTC AAGAAATACA TTGCTACTTT CAAGTTCAAG TCAATCGATA CAAGCACATT TCTTGAATTC CTGAAAGCAA ATATCCCCGG CATAGAGAAA GAGATCAACC TACAGCTGTG GACTGAGGGC GTTGGTATAC CAGAGGATGC ATATGAACCA GTCTCAACCA TTTACACAAA GATCATATCC CTGGCAAAAG AGTTTAAGGA AGGAAGGATG CCAAGTGAGG ATGATGTTGC TGAGTGGAAC GGACAGGAAT GGGAGCTGTA CTTGGAGAAT CTTCCTAAAT CATGTGAACC TTCTCAGGTG ATGGCCTTGG ACAAGCGGTA CAGACTAGCA GAATCGAAGG ACTATGAAGT GAAGGTCTCG TTTCTGCAGC TTGCAGTCGC ATCCAAGTGC AGAGAGTACC ATGGGGAAGT GAAGAAAACA CTAAAAGAGG TAGGGAGGAT GAAGTACCTG CGTCCACTCT TCACTGCTCT TGCACAAGCT GGTGGAACAG AAGAGAAGCA GCTGGCAAAA CAGGTGTTCG CAGAGGCTCG AGAAACTTAC CACCCTATAG CTCAGGGAGT GGTTGAGTCT ATTCTCTCTA AGTACATCTG AACAAGACCC TTCTTATAGC T 
Length1891
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5243776.. 5246257
Download Sequence
A.thaliana
AGI-codeAT5G13520.1
Descriptionpeptidase M1 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.2915 Ahg481152 Galactosyl transferase GMA12/MNN10 family protein
13.3417 Ahg331330 methyltransferase 1
19.799 Ahg474223 histone H2A 10
22.2486 Ahg941561 FAD/NAD(P)-binding oxidoreductase
29.4618 Ahg470059 Protein of unknown function (DUF630 and DUF632)
31.3209 Ahg489123 cellulose synthase-like A02
35.0286 Ahg479268 receptor-like kinase 902
39.6232 Ahg493292 Dynein light chain type 1 family protein
43.2666 Ahg904413 phosphoesterase
49.4368 Ahg481044 ribonucleotide reductase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression