| Annotation |
|---|
| Description | jgi|Araly1|331330|fgenesh1_pm.C_scaffold_8000673 |
| Sequence |
ATGGTGGAAA ATGGGACGAA AGCTGGGAAG GGGAAGAAGA GAGCACTTCC AGAGATTCAA GAGGTAGACG ATGTTTCTAG GACGAGGAGA CCGAGGCGTG CTGCAGCGTG TATGAATTTC AAGGAAAAAT CTGTTCGAGT CTGTGAGAAA TCCGCTACTA TTGAAGTAAA GAAACAGCAG ACTGTGGATG AAGAGTTCCT CGCGTTACGG TTAACGTCTC TGGACACCGA TGTCGAAGCT CGTCCAACCA GGAGGCTGAA TGATTTCGTT TTGTTTGATT CGGATGGAGT TTTACAGCCT GTGGAGATGT TGGAGATTAA TGACATATTT GTTTCGGGCG CTATCTTACC TTCAGATGTG TGTACTGACA AGGAGAAAGA GAAGGGTGTG AGGTGTCCAT CTTTTGGACG GGTGGAGAAT TGGAGTATTT CTGGTTATGA AGATGATTCC CCGGTGATTT GGATTTCTAC GGAGTTGGCG GATTATGACT GTCGTAAACC TGCTGCTAGC TACAGGAAGA TTTATGATTA CTTCTATCAG AAAGCGCGTG CTTCAGTGGC TGTGTATAAG ATATTGTCCA AGTCTTCAGG TGGTGATCCT AATACGAGTC TTGATGAGTT GCTTGCGGCG GTTGTCAGAT CAATGGGCGG AAACAAGTAC TTTTCTAGTG GTGCGGCAAT CCAAGACTTT GTTTTATCTC AGGGAGATTT TATATATAAC CAACTCGCTG GTTTGGATGA GACAGCCAAG AAACATGAAA CAAGCTATGT TGAGATTCCT GTTCTTGTAG CTCTCAGAGA GAAGAGTGGT AAAATTGACA TGGCTTTGCA GATGGAAGGA AAACCATCTA ATGGGGTTCT GAGGATTGAT GGAGTTTCTG AGGTTGCGGA CAGCGAGGAC ATGATATCTG ATCAACTGGT TGATGGTGCT GATGAAGACA GAAGATACGC TAAAGTGTTA CAAGATGAAG AGTACAGGAA ATCCATGCAG CGGTCCAGAA AAAACACTAG CTCAGCTTCT GCTTCAAATA AGGTCTACAT TAAGATAAAT GAAGATGAGA TTGCCAGTGA TTATCCTCTC CCATCGTACT ATAAGAACTC CAAGGAAGAA ACAGATGAAC TTATACTTTA TGATGCTTCC TATGAGGTTG ACGCTGAAGA CCTGCCTCGA AGGATGCTTC ACAACTGGGC TCTTTACAAC TCTGATTCAC GGTTCATATC TCTGGAACTT CTACCGATGA AACATTGTGA TGACATTGAT GTCACCATTT TTGGGTCAGG TGTGGTGACT GATGATGATG GAAGTTGGAC TTCTTTAGAC AATCCTGACA GCGGTTCCCA GTCACACGAT CCTGATGGGA TGAGCATATT CCTCAGTCAA ATAAAGGAAT GGGTGATTGA GTTTGGGGGG GATGATATTA TCGCCATTTC TATACGAACA GATGTGGCCT GGTACCGACT TGGGAAACCG TCAAAACTTT ATGCCCCTTG GTATAAACCT GTTCTGAAAA CAGCAAGGGT TGGGATAAGC ATTCTTGCTT TGCTCAGTGG GGAAAGTAGG ATTGCTAGGC TTTCATTTGC AGATGTCACA AAAAGACTGT CTGGGTTACA GATGAATGAT AAAGCTTACA TTTCTTCTGA CCCCTTGGCT GTTGAGAGAT ATTTGGTCGT CCATGGGCAA ATTATCTTAC AGCTTTTTGC AGTTTATCCC AACGATAATA TCAAAAGGTG TCCATTTAAT ATTGGTCTTG CAAGTAAATT GGAGGATAGG CACCACACAA AATGGATCAT CAAGAAGAAG AAAATTTTGC TGAAGGAACT GAATCTGAAT CCAAGGGCAG GCATGGCACC TGTGGTATCC AAGAGGAAAG CTATGCAAGC AACAACAACT CGCCTGGTCA ACAGAATTTG GGGAGAGTTT TACTCCAATT ACTCTCCAGA GGATTCATTG CAGGCGATTG GTGCAGAAAA TGGGGAGGAT GAAGTGGAAG AGGAAGGCGA AAATGGAGAG GAAGAGGTTG AAGGTGAAAA TGAGGATGTC ACAGAGGACA CTGTACAAGA ACCTGTTGAG GTTCAAAAGT CTCACACTCC CAAGAAAATT CGAGGCAGTT CTGGAAAAAG GGAAATAAAA TGGGATGGTG AGAGTCTAGG AAAAACTTCT GCTGGTGAGC CTCTCTATCG ACAAGCCCTT GTTGGAGGGG AAATGGTGGC TGTAGGTGGT GCTGTCACCT TGGAAGTTGA TGATCCAGAA GAAATCCCGG CCATCTATTT TGTGGAGTAC ATGTTCGAAA GTACAGATCA CTGCAAAATG TTACATGGTA GATTCTTACA AAGAGGATCT AAGACTGTTC TGGGAAATGC TGCTAACGAG AGGGAGTTAT TTCTGACTAA TGAATGCATG ACGGTACAGC TCAAGGATAT AAAAGGAATA GCCAGTTTTG AGATTCGATC AAGGCCATGG GGGCATCAGT ATAGGAAAGA GAACATCACT GCGGATAAGC TTGACCGGGC TAGAGCATTA GAAAGAAAAG CAAAAGATTT GCCTACAGAA TACTACTGCA AAAGCTTGTA CTCACCTGAG AGAGGGGGAT TCTTCAGTCT TCCACTAAGT GATATTGGTC GCTGTTCTGG GTTCTGCAAT TCATGTAAGA TAAGGGAGGA TGAAAAGGAG AGGTCTACAA TTAAACTAAA TGACTCAAAG ACAGGCTTTT TCTCCAACGG GATTGAATTT TCTGTTGAGG ATTTTGTCTA TGTGAACCCT GACTCTATCG ATGGAAAGGA GGGCAGTAAA ACTTCTTTCA AGTCTGGGCG AAACATTGGG TTAAAAGCGT ATGTTGTTTG CCAATTGCTG GAAATCGTTC CAAAGGAATC TAGAAAGGCT GATTTGGGTT TCTTTGATGT GAAAGTGAGA AGGTTTTATA GGCCTGAGGA TGTTTCTGCA GAGAAGGCCT ATGCTTCAGA CATCCAAGAA TTGTATTACA GCCAGGACAC AGATGTTCTC CCTCCAGGTG CTCTAGAGGG AAAATGTGAA GTAAGAAAGA AAAGTGATAT GCCCTTATGC CGTGAATATC CAATATCAGA CCATATTTTC TTCTGTGATC TTTTCTTTGA CTCCTCCAAA GGTTCTCTCA AGCAGTTGCC CGCCAATATG AAGTTGAAGT TCTCTACTAT TAAGGACGAC ACACTTCTAA GAAAGAAAAA AGGAAAGGGA GTAGAGAGTG AAACTGAGGC TGAGATTGTC AAGCCTGATG AGCCACCTAA AGAGATTCGT CTGGCTACAC TAGATATTTT TGCTGGTTGT GGTGGCTTGT CTCAGGGACT GAAAAAGGCG GGTGTATCTG ATACAAAATG GGCGATTGAG TATGAAGAGC CAGCTGGGCA GGCTTTTAAA CAAAACCATC CTGAGTCAAC AGTTTTCGTT GACAACTGCA ATGTGATTCT TAGGGCTATA ATGGAGAAAG GTGGAGATCA AGATGATTGT GTCTCTACTA CAGAGGCAAA TGAACTAGCA GCTAAACTTC CTGAGGACCA GAAGAGTACT CTGCCACTGC CTGGTCAAGT GGACTTCATC AACGGAGGAC CTCCATGTCA GGGGTTTTCT GGCATGAACA GGTTCAACCA AAGCTCTTGG AGTAAAGTTC AGTGTGAAAT GATATTAGCA TTCTTGTCCT TTGCCGACTA TTTCCGGCCA AGGTATTTTC TTCTGGAGAA CGTGAGGACC TTTGTGTCGT TCAATAAAGG GCAGACCTTT CAGCTTACTT TGGCTTCCCT TCTCGAAATG GGTTACCAGG TGAGATTTGG AATCCTGGAG GCAGGTGCAT ATGGAGTATC CCAATCTCGT AAAAGAGCTT TCATTTGGGC AGCTGCACCA GAAGAAGTTC TCCCAGAATG GCCTGAGCCA ATGCATGTCT TTGGTGTTCC AAAGTTGAAA ATCTCGCTAT CTCAAGGTTT ACATTATGCT GCTGTTCGTA GTACTGCACT TGGTGCCCCT TTCCGCCCAA TCACCGTGCG AGACACAATT GGCGATCTTC CATCTGTAGA AAACGGAGAA TCCAGGACAA ACCAAGTGTA TAAAGATGTT GCAGTCTCAT GGTTCCAAAA GGAGATAAGA GGAAACATGA TTGCTCTCAC TGATCATATC TGCAAGGCAA TGAATCAACT AAACCTCATT CGATGCCAGC ACATCCCAAA GAGGCCCGGG GCTGATTGGC ATGACTTGCC AAACGAAAAG GTTAAGTTAT CTAATGGGCA CGTAGAAGAA ATGATTCCTT GGTGTCTGCC AAACACAGCT AAGCGCCACA ACGGGTGGAA GGGACTATTT GGGAGATTAG ACTGGCAAGG AAACTTTCCG ACTTCCATCA CCGATCCTCA GCCCATGGGT AAGGTGGGAA TGTGCTTCCA TCCTGACCAG GACAGAATCC TCACTGTCCG TGAATGCGCC CGATCTCAGG GGTTTCCGGA TAGCTATGAG TTTGCAGGGA ACATAATACA CAAGCATAGG CAGATTGGGA ATGCAGTCCC ACCACCATTG GCGTTTGCTC TCGGTCGTAA GCTCAAAGAA GCCCTACATC TCAAGAAGTC TCCTCAACAC CAATCCTAA |
| Length | 4599 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 12067577.. 12073210 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G49160.1 |
| Description | methyltransferase 1 |
| TAIR curator summary | Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation. |
| Alias | [DDM2][DMT01][DMT1][MET1][MET2][METI][DECREASED DNA METHYLATION 2][DNA METHYLTRANSFERASE 01][DNA METHYLTRANSFERASE 1][methyltransferase 1][METHYLTRANSFERASE 2][METHYLTRANSFERASE I] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4 |
Ahg496254 | Replication factor-A protein 1-related |
| 5.47723 |
Ahg490375 | Minichromosome maintenance (MCM2/3/5) family protein |
| 6 |
Ahg496418 | structural maintenance of chromosomes 2 |
| 8.7178 |
Ahg481044 | ribonucleotide reductase 1 |
| 9.16515 |
Ahg922933 | minichromosome maintenance (MCM2/3/5) family protein |
| 9.74679 |
Ahg332862 | DNA-directed DNA polymerases |
| 9.79796 |
Ahg927425 | chromomethylase 1 |
| 13.3417 |
Ahg940818 | peptidase M1 family protein |
| 14.2829 |
Ahg923384 | presequence protease 2 |
| 15.4272 |
Ahg475864 | DNA polymerase alpha 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|