Detail



ID : Ahg940821

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940821|scaffold_601365.1
Sequence
ATAAGATCGA CGAGCATAAT ATGTCGTGGC TGCGAACGGC CGTGAATAAG GCGGTGGAGG TCGGAAACCG CAAAAACATC ACACGAACCG TCAAGAACTA TGCCGACTCC GTCGTCCAGC AGGCTGGCCA AGCCGTCGCT GAAGGAGCCA AATTGTTTCA AGACCGCATT GGTGTCGGGG CCTATAAGAG TGTTAATCAG ACGATTCAGA GATTGGAAGA AGCTGCAGTC TCATATAGAG GTCATGAAAG GGCATTGCTG ATTTCTAGAT GGCTAAATGT GCTTAAGGAG ATTGATAGAG CTACTGACAG TTCTCTAAAG GATAAACAAT TGAGTTCAGA GGAACAACTT GCTTCTGATG AAGCAAAGAA ACGTGAATGG GTGTTGTATT ACGATCCAGA TATAGGCGGT GAGCCACTTA ACTTCCGTGA TGTTTTTCTG CAAAGTCAAG CTCTGGAGGG GATCGTTCTG TCCATGATTA TTGAACCACC ACATGACGAA GAAATTACTC TACTCCTGGA GATGTTTGGG CTTTGTCTGA ATGGAGGAAA GGAAGTTCAT GATGCCATAG TTAGCAGTAT GCAGGATCTT GCTACAGTCT TTTCGAGTTA CAAGGATGAA GTTTTGGTTA AGCAGGACGA ATTGCTTCAG TTTGCCCAAA ATGCTATCAC AGGGTTGAAG ATTAATGCTG AAATGCTGAG AATTGATGCT GAAGCTTCTG ATCTGAGGAA GAAACTCGAG AAGATGAATG CCTCTCAAAT TCCACAGGAG AGTGGAGACA AGGAACTTAA AGAGGCTCCT TTAACAATTG AGGCTTTCAA AGAAACACTT GCAAAGATTC GTCTTTGCTC CAGATTAGAA GGTCTTCTAA TTAGAAAGAG ACAACTAAGC AACGGTGATT CGCCAGATAT ACATGCTCAG AAAGTCGACA AGCTCAGGGT GTTATTAGAA TCTTTAGCAA ATTCAACTTC CAAAGCCGAG AAACGAATAT CAGAAAACAG ACTTCAGAAA GAGGAGGCAC TAAAAGCTCG TGTGGTAAAA GCAAATGAAA CCGGTGAAAA GGAAAAGGAA TTGGGTGCAG AAATTGCACA GCTTGAGAAA CAAAGAGAAG AGCTGGAAGC CGAACTGAAG AGGGTAAATA TATCATTAGC TGCTGCTCAA GCTCGGTTCC GTAATGCGAC AGAGGAGAGG GATCAATTTG GTGAAGCCAA CAATCAGATA ATCGCTCACC TGAAAACAAA GGAGGATGAC CTGTCCAAAT CAGTTGTAGC TTGTAAGAAA GAAGCAGAAG TTATCAAGAC GTGGATTAAT TTTCTTGAGG ATACATGGCT TCTTCAATGC TCATATATCG AAACGAAGGA TAAGCAGACT TTGGACGAAT TGGAGAAGCA TGAGGATTAC TTCTCGGATG TGGCCTTTAA TATACTCTCT GTGTACAAGA AGGAGGTGGC ACCGTTAATA AGTCGTATAG AAAATTATGT GGAAAATCTG AAGAATCTGG GTCCTGGGTC GGAGAAGCCA CCAAACGCAG ATCAGGGAGA CAATCAGGTA TCAAACCCGA GGAAAATTCT GGAGCAGGAG TATATAGACT ATGAGACCAA GATTATTACC ACCTTCAGCA TTGTGGACAA CATGAAAGAG CAATTCCAGG TTCTCCAAAG CAAACTGGAT AAAAAGGACG ACCGGCGTGT GAAAGAGCTG TTTGATGACA TGGAGAAAAT GAGGCAGCAA TTTGAATCGA TAGCGAGGCC GATGTTAGAG ATAGAGATTC CATCGCCTAA AAGCAGTGTT ACATCACCTA AAAGCAGTGC TACATCACCC AAATCTCCCA AGCCCAGCAG TAGTAGCATG GATGATTCAA CTGAATCTAC TCAGACCCAA AAGCCGGAGC TGAGCAATCC TCCTCAGGCA CCCAATCCTA CAGCTGGTTC CAGTCAGGAG TTTAACCCTG AAGCTGAACT AGCCGAGCTA GAATCTGAAT TTGGTAAGGT GGCTCGTGAT TACTCTGCAG ATGAGGTTGA TGGATGGGAA TTCGATGAAC TTGAGAAAGA ACTGCAGTAG TAATCATGAC ACGCCTGCCT 
Length2080
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5262686.. 5267445
Download Sequence
A.thaliana
AGI-codeAT5G13560.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg478525
6 Ahg942891 global transcription factor C
13.1529 Ahg317971 ubiquitin-specific protease 13
18.7083 Ahg934149
18.8944 Ahg312915 IQ-domain 32
20.199 Ahg908702 FORMS APLOID AND BINUCLEATE CELLS 1C
21.9089 Ahg341749 Predicted eukaryotic LigT
25.0998 Ahg934879 Protein kinase family protein with ARM repeat domain
27.9285 Ahg333928 global transcription factor group E4
28.2843 Ahg485174 B12D protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression