| Annotation |
|---|
| Description | jgi|Araly1|942891|scaffold_603435.1 |
| Sequence |
GTTGCTTCTG GATTCTTTAG ATGGCAGACT CTCGGAATGG TAATGCGCGA GCTCCGAGTG GAGGAGTGCC TCCAAAAGCT GGGAATACTT ACTCCATAGA TGTTAAAAAT TTTATCTCAC GTGCAAGAGC TTTGTATGAG CACTGGAAGA AGCACAGTGC AGACTTATGG GGATCTGCAG ACGCTCTTGC CATTGCTACA CCTCCTGCTT CTGATGATCT GCGCTACCTG AAATCGTCAG CGCTGAATAT TTGGCTTCTT GGGTATGAGT TTCCAGATAC GATAATGGTT TTTACTTCAA AGCAGATCCA TTTCCTGTGT AGTAGGAACA AGGCATCTCT GCTTGAAGTT GTGAAGAAAG CTGCACATGA TGAGTTGAAG GTTGATGTTA TTATGCATGT TAAGCCTAAG GGTGATGATG GAACAGGGCT GATGGATGCC ATATTTCTAG CCATTCGAGA TCTATCCCGG GGTGATGGAA ATGATTCACA AGTTGTAGGA CACATTGCTC GTGAAGCCCC TGAAGGTAAG CTTCTGGAGA CATGGACTGA GAGGCTAAAG AATGCAAACT TCCAGTTTGT AGATATAACT GGGGGCCTGT CTGATCTCTT TGCTGTTAAA GACGATACTG AGGTCATGAG TGTGAAGAAA GCTGCTTATC TAGCCTACAG TGTGATGAAA AATGTTGTTG TTCCAAACCT TGAGAGTGCC ATTGATGAGG AGAAAGACGT CACCCACTCT GCCTTGATGG ATATCACTGA GAAAGCGATA CTTGAGCCAA CTAAGGCCAG TGTGAAGCTG AAGGCAGAAA ATGTTGACAT ATGCTACCCT CCGATATTTC AAAGCGGAGG CAAGTTTGAT CTCAAACCAA GTGCTGCAAG CAATGATGAA CTGCTCACTT ATGATCCAGC GAGTATCATA ATATGTGCTG TTGGTGCTCG GTATAATAGT TATTGCTCAA ATGTTGCCAG GACTTACCTA ATAGATGCAA CTTCTCTTCA GAGCAAGGCA TATGAGGTTC TTCTCAAGGC ACATGAGGCT GCTATTGATG CTTTGAGGTC AGGAAGAAAG ATAAACACTG TATATCAAGC TGCCCTTTCC GTTGTTGAAA AGAATGCCCC TGAGTTCGTT GACAAGCTAA CTAAATCTGC TGGGACTGGT ATCGGTCTGG AATTCCGAGA GTCAGGATTA AATATAAATG CAAAGAATGA TAAAGTATTG AGACCGAAGA TGGCATTTAA TGTGTCTCTT GGTTTCCAGA ACTTGGAATG TGAGTCAGAA ACCCGCAGCA AGAACAAGAA ATTCTCACTT TTGCTAGCTG ACACAGTTCT CGTCACAGAT CAGAAACCGG AGCTTTTAAC GAAGTGCTCT AAATCTGTTA AGGATGTGGC TTACTCCTTC AAAGAGGATG AAGAAGAAGA GAAACCACGC AAGAAATCTA GGACCAGCGG TTCTGAGAAC TACATTACCA AGACAGCTCT TAGATCAGAT GATCATGTGG TGTCGAAAGA AGAGCTACGG AAGCAGCACC AGGCAGAGCT GGCACGCCAG AAAAATGAAG AAACTGCCAG AAGGCTTGCT GGTGACAGGT CTGGGGCGGG AGACAGCCGG TCTACTGCAA AGACTTCAGC TGATGTGGTT GCCTACAAGA ATGTTAACGA CATGCCCCAT CGGGATTTGA TGATCCAGGT TGATACGAGG AACGAGGCTG TATTGTTACC CATCTATGGT AGCTTGGTTC CATTCCATGT GGCTACAATA AGAACAGTGT CAGGCAATCA AGATACCAAC CGGAACTGCT ACATCCGTAT CATTTTCAAT GTCCCGGGTA CACCCTTCAA CCCTCATGAC TCAAACTCTT TGAAAAACCA GGGTGCTATC TACCTCAAGG AGGTTTCATT CCGGACCAAG GATTCAAGGC ATAGCAGCGA AGTAACTCAG CAGATTAAGA CCCTTAGACG GCAAGTCATG GCCCGGGAGT CAGAGAGAGC TGAAAGGGCG ACATTGGTGA CCCAAGAGAA ACTTCAGCTT GCAGGGAACA AGTTCAAACC CCTCAGGTTG TCCGAGCTGT GGATCCGTCC GCCTTTTAGT GGGCGCAAGA AGATTCCTGG GACACTCGAA GCTCATGCAA ATGGTTTCAG GTATTCAACT ACCAGACCTG ACGAGCGCGT GGATGTCCTG TTTGCAAACA TAAAGCATGC GTTTTTCCAG CCTGCTGAGA AGGAGATGAT CACCCTCCTT CATTTTCATT TGCACAACCA CATCATGGTA GGAACCAAGA AGACAAAGGA CGTCCAATTC TATGTGGAGG TAATGGATGT TGTGCAGTCT TTAGGTGGTG GGAGGAGATC AGCCTATGAT CCAGATGAGA TTGATGAAGA ACAGCGAGAG CGCGATAGGA AGAACAAGAT CAACATGGAT TTCAATCATT TTGCAAACCG GGTGAATGAT ATGTGGCAAC TACCCCAGTT TGCAAGTCTG GACCTTGAGT TTGATCAACC TCTGAGAGAG CTTGGTTTCC ATGGTGTTCC GCACAAGACA TCTGCATTCA TTATACCGAC CTCTAGCTGC TTAGTTGAGC TGATAGAATT CCCGTTCCTG GTGGTCAGTC TTAGTGAGAT TGAGATAGTG AATCTTGAGA GAGTTGGGTT TGGGCAGAAG AACTTTGACA TGGCCATCAT CTTCAAGGAC TTCAAAAAAG ATGTTCTCAG GGTTGACTCA GTTCCCACAA GTTCGCTAGA GGGGATAAAG GAGTGGCTTG ACACTACAGA TATAAAGTAC TACGAGAGCA AACTGAATCT GAACTGGAGA CAGATCCTGA AGACGATCAC GGATGACCCA CAGAGCTTTA TAGATGATGG AGGATGGGAG TTTTTGAATC TGGATGGAAG CGACTCAGAA TCTGGAGGCT CTGAGGAGTC GGACAAAGGT TATGAACCGT CAGATGTGGA GGTTGAGTCT GAGTCAGAGG ATGAGGCTTC AGAGAGTGAG TCACTGGTGG AGTCCGATGA TGAAGAAGAA GAAGAGGACT CAGAGCAAGA GTCGGAGGAA GAGAAAGGTA AGACTTGGGA TGAACTGGAG AGAGAAGCTA CCAATGCAGA CAGAGAGCAT GGAGTTGAGT CTGATAGCGA GGAAGAGAGG AAGAGAAGGA AGATGAAAGC GTTTGGGAAA TCACGACCTG GAACTAGCGG TGGAGGCGGT CGTAGCAGCA TGAAGAACAT GCCACCATCC AAACGCAGCA AGCACAGGTG AAGAAATATA AAAAATTTCG G |
| Length | 3271 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 19402390.. 19405660 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G10710.1 |
| Description | global transcription factor C |
| TAIR curator summary | encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC. |
| Alias | [SPT16][global transcription factor C] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg951196 | Glycosyl hydrolases family 31 protein |
| 3.87298 |
Ahg484006 | Tudor/PWWP/MBT domain-containing protein |
| 6 |
Ahg940821 | |
| 8.24621 |
Ahg328336 | RING/U-box superfamily protein |
| 13.5647 |
Ahg938101 | Duplicated homeodomain-like superfamily protein |
| 14.5602 |
Ahg470503 | Helicase protein with RING/U-box domain |
| 19.3649 |
Ahg341749 | Predicted eukaryotic LigT |
| 25.923 |
Ahg486186 | villin 3 |
| 27.6586 |
Ahg480601 | ubiquitin family protein |
| 28.8444 |
Ahg472815 | phytochrome and flowering time regulatory protein (PFT1) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|