| Annotation |
|---|
| Description | jgi|Araly1|941236|scaffold_601780.1 |
| Sequence |
AAGGTGTGAC GAGGAAGAGA ATGGCGAAGG AAGCGGTCAA GTATGTATGG GAAGGAGCAA TACCTCTGCA GATATATCTC CACAAATCCG ACGTTGCTTC TCACCCTGCT CCTCCTCCTA CTCTTGTATT AGCACCAAGA ATAGGATATT TGCCTCTGTT GATTCCTCTT ATAAAGCCTT ACTTCAAGGA TTCACTTCCT CCTGGTGAAG ATTCAATCTG GTTCGATTAC AAAGGATTTC CTTTGAAATG GTATATACCA ACTGGTGTTC TTTTCGATCT CCTTTGCGCA GAACCAGAAA GACCTTGGAA TCTGACGATA CACTTTAGAG GATATCCTAG CAACATTCTG ATACCATGTG AAGGGGAAGA TTCCGTAAAA TGGAACTTTG TTAATTCTTT GAAAGAGGCA CAATATATCA TCAATGGAAA TTGCAAGAAT GTTATGAATA TGTCTCAGAG TGATCAAGAG GATCTATGGA CTTCTGTCAT GAACGGTGAT CTTGATGCAT ATACTAGATT ATCACCCAAG CTTAAAATGG GAACAGTTGA AGATGAGTTT TCAAGGACAA CAAGTTTGTC ATCTCCACAA TGTGGACAAG TTGTGGCTGA GACAGATGTG GCTGGTCAAG TTAAGACAGC AAGAATTCCT GTTCGGCTGT ATGTTCGAAG TATAAATAAA GATTTTGAGA ATCTTGAAGA TGTACCGGAG ATCGATACCT GGGATGACAT CTCGTACCTA AATCGCCCTG TTGAGTTCCT CAGAGAAGAA GGGAAATGCT TTACCTTACG TGACGCCATT GAAAGTCTCC TCCCTGAGTT CATGGGAGAC AGAGCGCAAA CGAGTGGAGA AGAAAGAAGC ATGGATGATA CAGAAGAAGA AGATGGTTCG AGGGAGACGG GTGAAATCAA ATTGGTAAGG ATCCAAGGGA TAGAAATGAA GCTAGAGATA CCGTTTTCGT GGGTGGTAAA TAACTTGATG AACCCAGAAT TCTATCTCCA TATCTGTGTT CTTGTGAAAG CTCCACAAAG GTGAAGTAAG GTTCTCTGCA GTCA |
| Length | 1054 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 6805854.. 6808482 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G17290.1 |
| Description | autophagy protein Apg5 family |
| TAIR curator summary | Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins. |
| Alias | [APG5][ATATG5][ATG5][AUTOPHAGY 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 22.2711 |
Ahg482783 | NAD(P)-linked oxidoreductase superfamily protein |
| 24 |
Ahg473471 | NAC domain protein 13 |
| 28.1069 |
Ahg934499 | SOUL heme-binding family protein |
| 34.2491 |
Ahg474972 | RING/U-box superfamily protein |
| 37.3497 |
Ahg943283 | NAD(P)H dehydrogenase B2 |
| 39.6989 |
Ahg495713 | |
| 41.7133 |
Ahg354720 | Transcription factor TFIIE, alpha subunit |
| 53.376 |
Ahg476091 | Dof-type zinc finger DNA-binding family protein |
| 55.8838 |
Ahg947849 | Calcium-binding EF-hand family protein |
| 57.9655 |
Ahg946493 | DWNN domain, a CCHC-type zinc finger |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|