| Annotation |
|---|
| Description | jgi|Araly1|941313|scaffold_601857.1 |
| Sequence |
TTTCTGGTTA AGTAATCGAG CGATGGTTAT TGCGGTGGCG GCAACGAGCT CCATAGTTTC CGGAATCAAG CTTTCAGGGA TCTTAACTTC TTTCAACGCC GTAGATGATG CGTCCAGTAG TTGCGGAAGA ACCAACTTGA CCGGAGTTAG AATTTTTCCG ACATTGAGTC GGCGACGATT CTCATCGATC GGAGCTTTGT CCCCAATTAG TGGGCATGCC CAATCTTCCT TTAGTCGCAG CTCTTTCGCT TTCCCTCAGA ATCTCGGTTT GAGCGGTGGT TTTAGTGCAG CTGAAGCTCT GCCACCTGCT TGTGAAAATG CCAGCCCTCC TTCCATCAAA TCTTTCAACC AGTTGATTGA AACTTTGATT GATCGGGTTG ATCTATCTGA ATCCGAGGCT GAATCATCTC TTGAGTTTTT GCTGAACGAG GCAAACGAGG CGCTGATTAG TGCCTTTCTA GTTTTGCTGA GAGCTAAAGG AGAGACATAT GAAGAAATTG TGGGGTTGGC TAGGGCAATG ATGAAGCATG CCAGGAAAGT GGAAGGACTA GTTGATGCTG TGGACATAGT TGGAACAGGT GGTGATGGAG CAAACACAGT CAATATATCA ACTGGATCTT CAATACTTGC TGCAGCTTGT GGTGCAAAAG TAGCAAAGCA AGGGAATCGT TCGAGTTCTT CTGCTTGTGG AAGTGCTGAT GTACTAGAGG CACTAGGAGT GGTGCTGGAC TTGGGACCAG AGGGCATTAA AAGATGTGTT GAAGAAGGAG GGATCGGTTT TATGATGTCA CCAATGTATC ATCCAGCTAT GAAGATCGTT GGCCCTGTCC GGAAAAAGCT TAAAATAAAA ACTGTTTTTA ACATATTGGG ACCTATGCTT AATCCTGCTA GAGTGTCTTA TGCTGTCGTT GGTGTATACC ACAAAAATCT GGTTGTTAAG ATGGCAAAGG CACTGCAACG ATTTGGAATG AAAAGAGCAC TGGTGGTTCA TTCATATGGT CTAGACGAAA TGAGTCCGTT AGGAGGAGGA CTAGTTTATG ATGTAACCCC GGAAAAGATC GAAGAATTCT CATTCGACCC ATTGGACTTT GGTATTCCTC GTTGTACTCT TGAGGATTTG CGAGGTGGAG ATCCAGACTA CAATGCGGAT GTGTTAAGGC GTGTGCTTTC AGGGGAAAGT GGAGCAATTG CAGATTCACT GATCCTAAAC GCAGCTGCAG CTCTTCTGGT TAGCAACCGA GTTCAAACTC TAGCTGAAGG AGTAACCTTG GCACGTGAAG TACAATCGTC AGGGAAAGCT ATCAAGACCC TTGATTCATG GATAAACATC TCGAACTTAG CTCAGAAATC TCAGTGACCA GAGAGGCTTA TGATATT |
| Length | 1377 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 7116205.. 7118658 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G17990.1 |
| Description | tryptophan biosynthesis 1 |
| TAIR curator summary | Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. |
| Alias | [pat1][TRP1][PHOSPHORIBOSYLANTHRANILATE TRANSFERASE 1][tryptophan biosynthesis 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.48528 |
Ahg931560 | lysm domain GPI-anchored protein 2 precursor |
| 8.7178 |
Ahg488263 | Rubisco methyltransferase family protein |
| 18.8149 |
Ahg943614 | Peptidase family M48 family protein |
| 26.0768 |
Ahg495590 | Dihydrolipoamide succinyltransferase |
| 36.7423 |
Ahg952462 | glutathione peroxidase 2 |
| 38.2361 |
Ahg479501 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| 41.2916 |
Ahg315447 | ILITYHIA |
| 41.8091 |
Ahg901385 | Phosphoribosyltransferase family protein |
| 45.2769 |
Ahg479642 | MAP kinase kinase 5 |
| 45.8258 |
Ahg487638 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|