Detail



ID : Ahg931560

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931560|scaffold_304017.1
Sequence
ACTCTCCGGC AACCTAAAAA ATGGAAACTT CCCGTTTTAC CCTTCTCGGT CTTCTCGTCT CCTTCTCCTT CTTCCTCACT CTCTCCGCCC AAATGACCGG AAACTTCAAA TGCAGCGGCT CAATCTCCAC GTGTCAATCT CTCGTTGGTT ACTCAAGCAA GAACGCAACA ACGTTGCGCA GTATCCAAAC CCTTTTCGCC GTCAAGAACC TCCGTTCGAT CCTCGGAGCT AACAATCTCC CACTCAACAC CTCACGTGAC CAACGCGTGA ACCCGAATCA AGTCGTACGT ATCCCAATCC ATTGTTCTTG CTCCAACGGA ACCGGTGTCT CGAACCGGGA CATCGAATAC ACCATCAAGA AAGACGACAT ACTCTCTTTC GTCGCAACTG AGATTTTCGG TGGTCTCGTT ACGTATCAGA AGATCAGTGA GGCTAACAAA ATCCCTAACC CAGACAAAAT CGAAATCGGT CAAAAGTTTT GGATCCCTTT GCCTTGTAGC TGTGATAAAT TGAACGGTGA GGATGTTGTT CACTACGCAC ACGTGGTTAA ACTAGGGAGC TCTCTCCGTG AGATCGCTAC TCAGTTTGGA ACGGACAACA CGACGTTGGC TCAGCTTAAT GGAATCATCG GTGACTCTCA GCTTCTTGCT GATAATCCTC TTAACGTCCC TCTCAAAGCT TGTAGCTCTT CTGTGAGGAA CGACTCGTTG GATGCTCCTC TGCTTCTGTC TAACAACTCA TACGCCTTCA CTGCAAACAC TTGCATCAAG TGTTCTTGTG ACGCTTCAAA GAATTGGACT TTAAGCTGTG AACCATCTCA GATTAGGCCT TCGAATTCGA CATGGCCAAC TTGCCCGCCT TCACGATGCG AAGGAGCAGA GAGTTTGTTT CTAGGCAACA CGACTAGCAG CTCTTGCGGA CCTCGTTCTT GCACATATGC TGGTTACTCC AACCAGACCA TCTTCACCAC ACTTTCCCCA ACTTGTCCAG ATTCTGCTGG TCCTGGTAAC TATGCATCAA CATTCAGCTC AAGCTTCAAT TTCGTGATGG TTTTGATTCA GTGTGCTTTG CTTTGTCTCT GTCTTCTCTA GTAGTGTTTT GTTGTTGTGT T 
Length1111
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20624512.. 20626028
Download Sequence
A.thaliana
AGI-codeAT2G17120.1
Descriptionlysm domain GPI-anchored protein 2 precursor
TAIR curator summary
Alias[CL-1][LYM2][LYP1][CEBiP-like 1][lysM domain GPI-anchored protein 2 precursor][LysM-containing receptor protein 1]
Gene coexpression
MR
MR Locus Description
1 Ahg943614 Peptidase family M48 family protein
4.58258 Ahg933950 NAD(P)-binding Rossmann-fold superfamily protein
7.07107 Ahg471269 S-locus lectin protein kinase family protein
7.2111 Ahg476236 Cupredoxin superfamily protein
7.48331 Ahg919631 copper/zinc superoxide dismutase 1
8.48528 Ahg941313 tryptophan biosynthesis 1
9.48683 Ahg951254 EXORDIUM like 2
9.59166 Ahg937978 NAD(P)-binding Rossmann-fold superfamily protein
14.1421 Ahg480005 Helicase/SANT-associated, DNA binding protein
14.5258 Ahg471578 RNA-binding KH domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression