Detail



ID : Ahg941736

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941736|scaffold_602280.1
Sequence
TATCACAGTA ATTGTAGACG GAGATGGAGA AAGTAAAGAT TGAAGAAATT CAGTCCACCG CTAAGAAACA GCGGATTGCT ACTCACACCC ATATCAAAGG TCTTGGCCTT GAGCCAACCG GTGTTCCTAT AAAATTGGCG GCTGGATTTG TTGGTCAACT TGAGGCTAGA GAGGCAGCTG GTCTTGTAGT GGACATGATT AAGCAGAAGA AAATGGCGGG TAAGGCTCTT TTACTTGCTG GACCTCCTGG AACCGGGAAA ACAGCATTGG CTCTTGGAAT TTCTCAAGAG CTGGGAAGCA AGGTTCCATT CTGTCCAATG GTTGGATCTG AGGTTTACTC ATCAGAGGTC AAGAAAACAG AGGTTCTCAT GGAGAATTTT AGACGTGCCA TCGGTCTACG TATCAAGGAA ACCAAAGAAG TCTATGAAGG GGAGGTCACC GAGCTGTCAC CAGAAGAAAC TGAAAGCCTC ACTGGAGGCT ATGGTAAAAG CATCAGCCAT GTTGTCATTA CACTCAAGAC AGTCAAAGGA ACCAAACATC TGAAGTTGGA CCCCACTATA TACGATGCCT TGATTAAGGA AAAGGTAGCT GTAGGTGATG TTATCTATAT CGAAGCAAAC AGTGGAGCTG TCAAACGGGT AGGTAGAAGT GATGCTTTTG CCACTGAATT CGATCTGGAA GCAGAAGAAT ATGTTCCACT TCCCAAAGGA GAGGTTCACA AAAAGAAAGA AATAGTGCAG GATGTCACAC TCCAAGATCT GGACGCAGCA AATGCTCGAC CTCAAGGTGG CCAGGATATA CTTTCTTTGA TGGGCCAAAT GATGAAACCC CGGAAGACTG AGATCACTGA TAAGCTTAGG CAAGAAATTA ACAAGGTTGT GAATCGTTAT ATAGATGAAG GTGTGGCGGA GCTTGTTCCT GGAGTTCTAT TTATCGATGA GGTTCATATG CTTGATATGG AGTGCTTTTC ATACTTGAAC CGTGCTCTTG AGAGCTCATT ATCCCCCATA GTGATATTTG CAACAAATAG AGGTGTTTGC AACGTAAGAG GGACTGATAT GCCCAGCCCC CATGGAGTTC CTATTGACCT ATTGGATCGA TTGGTCATTA TCCGGACTCA AATCTATGAT CCCTCTGAAA TGATACAGAT TATAGCCATT CGTGCGCAAG TTGAAGAACT AACGGTGGAT GAAGAATGCT TGGTTCTACT TGGGGACATT GGGCAAAGAA CTTCACTAAG GCACGCTGTG CAGCTCCTGT CTCCTGCCAG CATTGTGGCG AAAATGAATG GACGTGACAA TATTTGCAAG GCTGATATAG AGGAAGTAAC ATCACTCTAC TTGGATGCCA AATCTTCAGC AAAGCTTTTG CATGAGCAAC AAGAAAAATA CATCTCATAA GAACACTAGT CGCACATTTT 
Length1420
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8847294.. 8850419
Download Sequence
A.thaliana
AGI-codeAT5G22330.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias[ATTIP49A][RIN1][RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1]
Gene coexpression
MR
MR Locus Description
1 Ahg478202 ARM repeat superfamily protein
3.4641 Ahg941614
4.69042 Ahg935477 methionine aminopeptidase 1A
8.06226 Ahg919890 translation initiation factor 3 subunit H1
9.05539 Ahg487274 Glycosyl hydrolase family protein
10.9545 Ahg494462 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
12.8452 Ahg478826
14.2829 Ahg480524 nucleosome assembly protein 1;2
15.8114 Ahg471723 CASC3/Barentsz eIF4AIII binding
19.6214 Ahg495374 RNA-binding KH domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression