Detail



ID : Ahg480524

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480524|fgenesh2_kg.3__3225__AT2G19480.2
Sequence
TTATTTCGGT GTGGTCATTT TCTCGAAGCC CTTTTATTTA TATATAAATA TATTTCTTTT TCTCTTATTA GTCCCCAAAA ATCTAGGGTT TTAAGGTTTC TTATCCTTCC TCTTCCTCCG CCAGATTCTT TTCTTGCGAA GATGAGCAAC GACAAGGACA ACATGAACAT GTCCGATCTC AACGCCGCTC TTAACGAGGA GAATCGTGCC GGGCTTGTTA ATGCTCTTAA GAACAAGTTG CAGAATTTGG CTGGACAACA CTCTGATGTC CTTGAAAACT TGACTCCAAC AGTCAGGAAG CGTGTGGAGG TTCTAAGGGA GATTCAGAAC CAATATGATG AAATGGAAGC AAAATTCTTC GAGGAAAGGG CAGCTCTGGA AGCGAAATAT CAAAAGTTAT ATCAGCCTTT ATATACCAAG CGATATGAGA TTGTGAATGG TGTGGTCGAA GTTGAAGGTG CAGGGGAAGA TGTAAAATCT GAACAAGGAG AAGACAAAGC AGAAGCAGAG AAAGGAGTGC CAGATTTTTG GCTTATTGCA TTGAAGAACA ATGAAATTAC TGCTGAGGAG GAGATAACTG AGCGAGATGA AGGGGCTCTC AAGTATCTTA AAGATATCAA GTGGAGTAGG GTTGAAGAAC CAAAAGGGTT CAAGCTTGAG TTTTTCTTTG ATCAGAACCC TTACTTCAAG AACACTGTCT TGACCAAGAC ATATCACATG ATTGATGAAG ATGAGCCTAT CCTTGAGAAG GCCCTCGGGA CCGAGATTGA GTGGTATCCT GGAAAGTGTT TGACTCAGAA GATTCTAAAA AAGAAGCCAA AGAAAGGATC CAAAAACACA AAGCCGATCA CTAAGACTGA GGACTGTGAG AGTTTCTTCA ACTTTTTCAG TCCACCTCAA GTTCCTGACG ATGATGAGGA TCTTGATGAT GATATGGCTG ATGAACTTCA AGGCCAAATG GAGCACGACT ATGATATCGG GTCAACAATT AAAGAGAAAA TCATCTCGCA TGCTGTGTCA TGGTTCACTG GTGAAGCTGT TGAGGCAGAT GACCTTGATA TTGAGGAGGA CGATGATGAG ATTGATGAAG ATGATGATGA CGAGGAAGAT GATGAGGATG ACGAGGAGGA TGATGATGAG GATGATGACG AGGAGGAAGA AGCAGATCAA GGAAAGAAGA GCAAAAAGAA GAAGGCTGGA AGAAGTCAAC CTGCGGAAGG TCAAGCAGGT GAGAGGCCAC CGGAATGCAA GCAGCAGTGA AGAACTGAAG AATCTTGGCT TATCTATGAA GAAGAAGTCT TTGAGCCGAG GTTGTGTTTC TTAATTTGCA GAGTCATGGT CCGGTTAATT ATATATCAGT TTTGGGTGGT TGGTTTGCTT TTGGTTTGGT TTGTGTCTCT TGATTTTTCA TTTGTAATGT TCTTATGAAT TTGATTTGAG TTAATGTCGT TCTGGTCAGA TTTCGAATCC AATTTTATTT ATTCTC 
Length1486
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19866152.. 19869051
Download Sequence
A.thaliana
AGI-codeAT2G19480.1
Descriptionnucleosome assembly protein 1;2
TAIR curator summaryThis gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.
Alias[NAP1;2][NFA02][NFA2][nucleosome assembly protein 1;2][NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 02][NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 2]
Gene coexpression
MR
MR Locus Description
6.55744 Ahg471060 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases
7.74597 Ahg477651 TCP-1/cpn60 chaperonin family protein
8 Ahg480467 RNA-binding CRS1 / YhbY (CRM) domain-containing protein
9.8995 Ahg493124 Hyaluronan / mRNA binding family
10.6771 Ahg947841 ribosomal protein L5 B
14 Ahg472396 plastid transcriptionally active 6
14.1421 Ahg940873 phosphate transporter 3;1
14.2829 Ahg941736 P-loop containing nucleoside triphosphate hydrolases superfamily protein
15.0997 Ahg477114 Aldolase-type TIM barrel family protein
17.9444 Ahg353700 DNA topoisomerase, type IA, core
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression