Detail



ID : Ahg941835

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941835|scaffold_602379.1
Sequence
CAGAACAACC CTAGATTCCG ATGATGAGGG GTCTTGTTTC CGGTGCCAAG AGGCTATCAT CCCCATCGTC GAGCATCGCC ACTGCTAGAA GAAGCTACAG TCTGATTCCG ATGGTTATTG AGCACTCATC GCGAGGAGAG AGAGCTTACG ACATCTTCTC TCGTTTGCTC AAGGAGCGTA TTATCTGCAT CAACGGTCCC ATTAATGACG ATACGTCTCA CGTCGTCGTC GCTCAGCTTC TTTACCTCGA GTCTGAGAAT CCTTCCAAGC CGATCCATAT GTATCTCAAT TCACCTGGCG GCCATGTCAC CGCCGGTCTT GCAATTTATG ATACTATGCA GTACATTCGC TCTCCGATAA GCACAATTTG TTTAGGTCAG GCTGCATCAA TGGCTTCTCT GCTCTTGGCA GCGGGTGCCA AGGGGCAAAG GCGGTCGCTT CCAAATGCAA CTGTTATGAT TCATCAGCCT TCGGGAGGAT ATAGCGGACA GGCTAAGGAT ATAACGATTC ATACAAAACA GATTGTTCGT GTGTGGGATG CGTTAAATGA ACTGTATGTC AAACATACGG GTCAACCTCT TGACGTGGTT GCTAATAACA TGGATAGGGA TCATTTCATG ACTCCTGAAG AGGCTAAGGC GTTTGGAATA ATCGATGAAG TAATTGATGA AAGACCGTTG GAGTTGGTGA AAGATGCAGT TGGAAATGAA AGCAAAGATA AGAGTTCAAG TTAGGAAGTA ACTGGTAATC AAAG 
Length754
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G23140.1
Descriptionnuclear-encoded CLP protease P7
TAIR curator summaryOne of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).
Alias[CLPP2][NCLPP7][nuclear-encoded CLP protease P7]
Gene coexpression
MR
MR Locus Description
3 Ahg481915 transducin family protein / WD-40 repeat family protein
4.69042 Ahg489026 LA RNA-binding protein
8.12404 Ahg478516 lysyl-tRNA synthetase 1
10.0995 Ahg478296 S1FA-like DNA-binding protein
10.9545 Ahg949437 ATP citrate lyase subunit B 2
13.1909 Ahg476389 tRNA synthetase beta subunit family protein
14.8324 Ahg933884 gamma subunit of Mt ATP synthase
16.9706 Ahg487814 26S proteasome regulatory subunit, putative (RPN5)
19.2354 Ahg496832 P-loop containing nucleoside triphosphate hydrolases superfamily protein
21.4942 Ahg483631 PLAC8 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression