Detail



ID : Ahg478516

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478516|fgenesh2_kg.3__1217__AT3G11710.1
Sequence
AAAACTTGAA ACAACAATCT GAGAAAAGAG CGTTTTATCT TGTTGATTTT GAAATCTCCT CCAAAACGAT GGAAGGTTCA GCTGATCAAA CTACGAAAGC GTTATCTGAA TTAGCCATGG ATTCTTCTAC CACCTCGAAT GCTGCTGAGT CTAGCGCTGG TGATGCAGCT GGACCTCGGA GTAAAAATGC TCAGAAGAAG GAACTGAAAT TGAAGCAGAA AGAGGAAGAG AGGAAACGCA AGGAAGAAGA GAAGGCTAAA CAAGCTCCGA AAGTAAGCTC CCAGAGCCAG AAGGCAGTGG CAGCAGATGA TGAAGAGATG GATGCAACGC AATACCATGA GAACAGATTG AAATATCTTG CGGCTGAGAA GGCTAAAGGG GAGAATCCAT ACCCTCACAA GTTCTCTGTG TCAATGTCCA TTCCTGAATA CATTGAGAAG TATGGTAGTT TAAACAATGG AGATCATGTT GAAGACGCTA ATGAATCTCT AGCTGGGCGG ATAATGAGCA AGCGATCTTC CTCTTCCAAG CTCTTCTTCT ATGATCTACA TGGTGATGAT TTCAAGGTCC AAGTCATGGC TGATGCAAGT AAGTCAGGAT TGGATGAAGC TGAGTTCTTA AAGCTCCATT CGAATGTCAA GCGTGGTGAT ATTGTTGGAG TCACTGGGTT TCCAGGAAAA ACTAAGAGGG GAGAATTGAG TATCTTTCCC CGATCATTTA TCCTTCTGTC CCATTGCCTC CACATGATGC CGAGAAAGGC TGATAATGTT AATGCAAAGA AACCTGAAAT CTGGGTTCCA GGTGAAACGA GAAATCCTGA AGCATATGTT CTGAAAGATC AGGAATCAAG ATATCGCCAG CGTTATCTTG ATCTGATGTT GAACGTGGAG GTTCGTCAGA TATTCAAGAC CAGAGCTCAT ATCATCTCCT ACATCCGCAG ATTCCTCGAC AACAAAAATT TCTTGGAGGT CGAGACACCT ATGATGAACA TGATTGCTGG TGGTGCAGCT GCTCGACCAT TTGTGACACA TCACAATGAT CTAGATATGA GGCTGTACAT GCGTATCGCA CCTGAACTCT TTCTCAAGCA ACTTATAGTT GGTGGCTTGG AACGTGTTTA CGAGATAGGA AAGCAATTCA GAAACGAGGG TATTGACCTG ACCCACAATC CGGAGTTCAC CACTTGCGAG TTCTATATGG CCTTCGCAGA CTACAATGAC CTGATGAAGA TGACTGAGGA TATGTTGAGT GGCATGGTCA AGGAGTTAAC AGGTGGTTAT AAAATCAAGT ATCATGCTAA TGGGTATGAT AAGGATCCAA TTGAAATCGA CTTCAAGCCA CCATTCAGGA GGATTGAGAT GATAGGAGAG TTGGAGAAGG TGGCTAACCT CAATATACCA AAAGACTTGG CTAGCGAAGA AGCTAACAAG TATCTGATTG ATGCATGTGC GAGGTTTGAT GTCAAATGCC CTCCTCCTCA GACAACAGCT CGTTTGTTGG ATAAACTTGT TGGAGAGTTT CTGGAAGTGA CATGTGTGAA CCCAACTTTC ATCATCAACC ATCCTGAGAT CATGAGTCCA TTGGCAAAAT GGCACAGATC GAACAATGTT TTGACAGAGA GATTTGAGCT GTTCATCAAC AAACATGAAC TCTGCAACGC CTACACGGAG CTGAACGATC CTGTGGTACA GCGCCAGCGT TTTGCTGATC AGCTCAAGGA TCGACAATCT GGAGATGATG AAGCGATGGC TTTAGATGAG ACATTTTGTA GTGCTTTAGA ATATGGGTTG GCTCCAACAG GTGGTTGGGG ATTGGGTATA GACAGACTTG CTATGCTTTT CACTGACTCA CAGAACATCA AGGAGGTTAT TCTCTTCCCG GCAATGAGGC CACCACAGGA CGAGTCAGTA GCCCCTAAAG CTCCTTTAAC AGAAGAGAAG AAATAAGGAG AGTCTGCACA AGTTTTCAGA CTAAGCTTAG TCAATTGGCT ATTATGCACT CTGTTCTCAA GTTACTTGTA ATTGCAGACC ATAATTTTCA AAAATTATTT ACCAATTAGT TATGATCAAA AACCTTTGTA AGACTTTTTT GCAATC 
Length2096
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4431793.. 4435247
Download Sequence
A.thaliana
AGI-codeAT3G11710.1
Descriptionlysyl-tRNA synthetase 1
TAIR curator summary
Alias[ATKRS-1][lysyl-tRNA synthetase 1]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg482209 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
4.79583 Ahg921888 Nucleotidylyl transferase superfamily protein
5.65685 Ahg494092 Cysteinyl-tRNA synthetase, class Ia family protein
6.245 Ahg483560 Citrate synthase family protein
7.74597 Ahg482274 MOS4-associated complex 3B
7.87401 Ahg471861 arginine/serine-rich 45
8.12404 Ahg941835 nuclear-encoded CLP protease P7
9.16515 Ahg473141 SecY protein transport family protein
11.225 Ahg476389 tRNA synthetase beta subunit family protein
12.6491 Ahg931036 adenylate cyclases
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression