Detail



ID : Ahg942697

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942697|scaffold_603241.1
Sequence
CGGTTCGTCT CTTACGGTGG AGATGGAGGA GGAAGAGTCT CCGGCGACGG CGATTGCACC GAGAGAACCA CCGAAGATTC AACGCCTAGA GGAATCAGTG GTCAACCGTA TCGCAGCTGG TGAAGTAATC CAGCGTCCAG TTTCAGCGGT GAAGGAGCTC GTTGAGAACA GCCTCGACGC CGATTCAAGT TCCATAAGCG TAGTTGTTAA AGACGGTGGA TTGAAACTCA TTCAAGTCTC CGACGACGGT CACGGTATTA GACGTGACGA CTTGCCGATA TTATGCGAGA GACATACGAC ATCGAAGCTG ACTAAGTATG AGGATTTGTT TTCTTTGAGT TCAATGGGAT TTAGAGGAGA GGCATTGGCC AGTATGACTT ATGTTGCTCA TGTTACAGTA ACTACAATTA CTAAAGGCCA GATTCATGGT TACAGAGTGT CTTATAGAGA TGGTGTCATG GAGAATGAAC CAAAGGCGTG TGCAGCTGTT AAAGGAACAC AGATAATGGT GGAGAATTTG TTCTACAATA TGACTGCTAG AAGGAAGACA CTTCAAAATT CTGCTGATGA TTATGGGAAA ATAGTAGACT TGCTAAGTCG GATGGCTATT CATCACAATA ATGTCAGCTT TTCTTGTCGA AAGCATGGAG CTGTTAAGGC TGATGTTCAC TCAGTCGTGT CGCCATCAAG GCTTGATTCC ATCAGATCTG TTTATGGAGT ATCAGTTGCA AAGAACTTGA TGAAAGTAGA AGTTTCCTCC TGTGACCCTT CCGGTTGTAC TTTTGATATG GAGGGTTTCA TATCCAATTC AAACTATGTT GCTAAGAAGA CCATATTGGT GCTTTTCATT AATGATAGAT TGGTGGAATG CTCTGCCTTA AAAAGAGCCA TTGAGATTGT TTATGCTGCA ACATTACCAA AAGCATCGAA ACCTTTTGTC TACATGTCAA TCATTTTGCC ACGGGAACAT GTTGATATCA ATATTCACCC AACAAAGAAA GAGGTTAGCC TACTAAACCA GGAAATCATT ATTGAGATGA TACAGTCAGA GGTTGAAGTA AAACTGAGAA ACGCAAATGA TACTAGGACG TTTCAAGAGC AGAAAGTGGA ATACATTCAA TCTACGTTAA CATCCCCAAG AAGTGATTCT ACAGTTTCTC AGAAGCTTTC TGGACAAAAA ACACAGAAAG TTCCTGTGAA CAAAATGGTG AGAACAGATT CATCAGATCC AGCTGGAAGG TTACATGCCT TTTTGCAACC CAAGCCACAT AATCTCCCTG ACAAGGTTTC TAGTCTGAGT GTAGTTAGGT CTTCGGTAAG GCAAAGAAGA AACCCAAAGG AAACTGCTGA TCTTTCTAGT GTCCAAGAAC TTATTGCTGG AGTTGACAGC TGCTGCCATC CAGGTTTGCT GGAGACTGTG AGGAATTGCA CATATGTTGG AATGGCAGAT GATGTTTTTG CTTTAGTTCA GTATAACACC CATCTATATC TAGCAAATGT GGTGAACCTC AGCAAAGAGC TTATGTATCA GCAAACTCTT CGTCGTTTTG CTCATTTTAA TGCAATACAG CTTAGCGATC CAGCCCCTCT GTCCGAGTTG ATATTGTTGG CTCTGAAAGA GGAGGATCTA GATCCAGAAA CTGATAAAAA TGATGATTTG AAAGAAAGAA TCGCTGAAAT GAATACAGAA CTCCTCAAGG AAAAAGCGGA AATGTTAGAG GAGTATTTCA GCGTTTACAT TGACTCCAAT GGAAATTTGT CACGGCTTCC TGTCATACTC GACCAGTATA CACCTGACAT GGATCGTGTT CCCGAATTTT TACTATGCTT GGGAAATGAT GTTGAGTGGG AAGATGAGAA GAGTTGCTTT CAAGGAGTTT CTGCGGCTAT TGGGAACTTT TACGCCATGC ATCCTCCTCT TTTGCCAAAT CCATCGGGTG ACGGTATTCA GTTCTATACT AAGAGAGGTG AGAGCTCTCA GGAAAAGTCA GATTTAGAGG GTAACGTCGA GATGGAGGAT AATCTTGACA AAGATCTTCT GTCAGATGCT GAAAACGCAT GGGCACAACG TGAATGGTCA ATCCAACACG TGCTGTTTCC GTCAATGAGA TTGTTCTTGA AGCCACCAGC TTCCATGGCT TCAAATGGGA CTTTTGTAAA GGTAGCATCC CTTGAAAAGC TGTACAAGAT ATTCGAACGA TGCTAGTTGA AATCGCTGTT CGCATAT 
Length2227
Protein Sequence
Protein Residue
Map Locationscaffold_6: 18171287.. 18175327
Download Sequence
A.thaliana
AGI-codeAT4G09140.1
DescriptionMUTL-homologue 1
TAIR curator summaryEncodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization.
Alias[ATMLH1][MLH1][ARABIDOPSIS THALIANA MUTL-HOMOLOGUE 1][MUTL-homologue 1]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg326105 DNA repair protein Rad4 family
5.65685 Ahg480465 protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases
5.74456 Ahg493113 casein kinase II beta chain 2
5.91608 Ahg478675 evolutionarily conserved C-terminal region 5
8.3666 Ahg918566 RADIATION SENSITIVE 17
10 Ahg912571 Protein of unknown function (DUF3506)
11.8322 Ahg475810 HEAT repeat-containing protein
12.1655 Ahg471712 protein-protein interaction regulator family protein
16.4924 Ahg921521 5'-AMP-activated protein kinase-related
19.3907 Ahg492695 P-loop containing nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression