Detail



ID : Ahg912571

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|912571|Al_scaffold_0001_2825
Sequence
ATGGCGACAA CTCATCCATG TCTTATCGGC CAAAGAATCT CTGTTCCTCA ATTTCACCTC CTCTTCAGCC CCAAAAATTC TCCAAATCCG GAGCTCTCCA CCAACAAACG CACCAATTTC TCCGTATCTA TCGGCCTACG ACATTCCTTC GCTTCTATAA CAACCTGGAA CCCTAAGAAA CCGTCTTTAA GCTGTCTGCG AAATTGCGCC GCCGTTGATG GCGCAGATAC CAGTTCGTGT GAGGATAAGT GGGATTGGGA TCGTTGGAAC CGCCACTTCT CCGAGATTGA AGAAGTCGAG ACCGTTGTTT CTCTTCTCAA GTCTCAACTT GAAGATGCTG TTGAAAAAGA AGACTTTGAA GAAGCAGTAA AGTTGAAACA AGCTATTGCA GAAGCTACTG TTGATGATGC TGTTGCTGAG ATCATGCGCC AGTTACAGAC TGCAATAAGC GAAGAGCGTT ACCATGATGC TTCCAGGTTA TGTAACGAGA CAGGAAGTGG ACTGGTGGGT TGGTGGGTTG GTTATCCTCG AGATTCTGAG GAACCATTTG GCAGAATTGT ACACATAACT CCAGGTGTTG GTAGGTTTAT TGGCAAGAGT TACAGTCCAA GACAGCTGGT GGCTGAAGCA GCTGGAACAC CTCTGTTTGA GATTTTCGTT GTTAAAGACA CTGACGGAGG ATATGTTATG CAGGTGGTGT ATTTGCAACA CGTGAAGCAA AACCTGTCCA TTTCCGAGAA TTCCTATTTA AGAGCACAGC AATCATCAAA TACCTCAATC GATGACCCAT CCATTCTAGA TGTACGAGGA AGTGAACTGA AGTCGGATAA AAAAGAAGAT ATACAACTAA ATTCTGGGGA ACCAACTGAA GAAGGAATAA AAAATGTGAT AAAATTTCTA AAAGATAAAA TCCCAGGGCT AAAACTGAAA GTAATGGATG TTATTAAAAT CCCTGAGGAA GAGATCGTAG GCAGTGATGC TGCTACTGAA GAGCTGGTTG GAGAAGGCAT TGAGGAAACA AATTCTTCCG ATGATGAAGA AGAAGAAGAA GAAAATGACA GTATTGAAGA AATCTCATCT ATGGATAGTG CAGATTATGG AAAGCATTTA AACACTAAGC TTGTCATCGG AGGGGTTCTA CATAACATAG AGGATTCCTC TATAGATGAT GAGATTGACC GTGTCTCGGC AGATATAATG GATGCTGAAA GGGATTCCTT TATCTTGCAC GTTCCTGGGA GAAGTAAGAT TGATATCGAT ACAAGGAAAA ACGGAGTGTC CAAGGAACAA GTAACAGCTC TTGCAGCTCA AGGAATTTCA GATTTGATGC CACCAGAGGT TGCCAAGGCG TTCTGGGGTT CAGAAAAAGC TTCTTTGAAG GTATCGAGAA ATGTGCGTGA GATTGTCAAG CTTGCTATAA ATCAGGCGCA AAAAGGAAAC CGTCTCTCGG AGTATACATC ATTTAATAGA ATCATAACTC CTGAAAGCAA CCTAGACCCT TTTGATGGCC TATATGTGGG TGCATTCGGG CCTTATGGCA CTGAGATAGT GCAACTTAAG CGTAAGTATG GTCGGTGGAA TGATGCAGAA GGAAGTAACT CCTCAGATAT AGAGTTCTTT GAATATGTTG AGGCTGTAAA GTTGACAGGG GATCCAAATG TGCCGGCTGG CGAGGTGACC TTCCGTGCAA GGATCGGGAA TGGGAGTCGC ATGACGAATC ATGGTTTGTT TCCAGAGGAA TTGGGAGTGC TTGCGAGTTA CAGAGGACAA GGAAGAATCG CAGACTTTGG GTTTAAAAAC CCAAAATGGG TCGAGGGCAA GCTTTTAAAA CTCAACGGAA AGGGAATGGG ACCATATGTG AAGGGTGCGG ATCTTGGATT TCTATATATT GGCCCTGAGC AGAGTTTCTT GGTCGTTTTC AACCGTCTGA GACTGCCTGA GTGA 
Length1944
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11430917.. 11434058
Download Sequence
A.thaliana
AGI-codeAT1G27510.1
DescriptionProtein of unknown function (DUF3506)
TAIR curator summary
Alias[EX2][EXECUTER 2]
Gene coexpression
MR
MR Locus Description
10 Ahg942697 MUTL-homologue 1
16.1864 Ahg926333 RNA-binding (RRM/RBD/RNP motifs) family protein
16.9706 Ahg934672 Protein kinase superfamily protein
18.5742 Ahg923366 elongator protein 2
21.166 Ahg486659 Plant protein 1589 of unknown function
21.4942 Ahg916775 Zincin-like metalloproteases family protein
21.7486 Ahg496646 Inositol monophosphatase family protein
25.923 Ahg490158 Inositol monophosphatase family protein
26.4575 Ahg491860 CDK-activating kinase 1AT
26.9444 Ahg333932 Putative endonuclease or glycosyl hydrolase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression