| Annotation |
|---|
| Description | jgi|Araly1|942978|scaffold_603522.1 |
| Sequence |
TTGGTGCTTG ATTCGTGCCG ATGAAGTGCC GATCCGTGGC CTGCCTCTGG TCTCGAGCTC CTCCATCTCA TCGAGTCACC GCCACAGCCT CTCTAACAAA TCCACCGACT CTCTATACCG GTGGATCCGA TGGGTCAATC ATCTGGTGGA GCATCTCGTC TTCTTCCGAG TCCAATTCGG TAACTCGTCT CTCGTCTTCC GAGATTAAGC CGATTGCTAT GTTGTGTGGC CATACTGCAC CAATAGTGGA TCTTGCCGTT TGTGATCCTA CTACGGTTTC AGGGAACGGA GTTACATCAG ATTGTTCGGA TAATGGTAAC GCGGATCCGT TTGTTAACTG TTGTGCATTG ATCAGTGCTT GTTCTGATGG TGTATTGTGT GTATGGAGTA GAAGTAGTGG TCATTGTAGG CGGCGTAGAA AGTTACCTCC TTGGGTTGGA AGTCCGTCGA TTTTGTGTAC TTTGCCATCA GAGCCTAGAT ATGTATGTGT TGGGTGTTCT TATATTGATA CTCAATCTGT TGATACTGTT GATGGGGCTG AGACTTTAGC AGATACTGAT TTTCAGAACA GGAAACCGTC GAGGTGTACT GTGGTGGTTG TTGATACTTA TACTCTTACG ATTGTTCATA CAGTTTTCCA TGGGAATTTG TCTATTGGTT ATTTGAATTT TATGGGTGTG GTGCAATTGG AGGAGCAGGA ATCGTTGCTT ATGGCGGATT CGTTTGGTAG GTTGCAGTTG GTTCCTGTGT CAGAGAATTC TGAGAAGGGT GAAGATGTAT CTGAGTCGAG CAAAGGCTCT GTCGTGTCTA GGAACTGGTT AAATGAAGGG GAAATAGCTG TATCAGTGAT AACCCGAGGG AAGCTTGTTG CTTTTTTCTC AAAGAATAGG TGTGTCTTTT GGTTGTTGAA TCGCGAGGAG GCAATAGGAG AGATATCTTT TGTTGATGAT TCGCTTTGTT CTGAAAATCA TCCTCCAAAT TTTCATTTCA AAGAAGCAAT GATACTTTAC TCTAGTACAT CAACTATCGA AGGTGATAAA GATGATAGAA TTTCCGAAAC TTTTGTGCTG TGGGATGATA GTGGTTCAGC TGTGCTGTTT GTTATGTCAT ATATAGATGG AGATTTTACA TATAAAAACC TCGGTGAGAT TGTTACTTCC CCTGATAAGC GTTCCGTTAA ATCAACGTTT TGTTTTGTAC AGTTGAGGCA GTATCTTCTT CGCGTTGAGT CTACCTGTTG TGATGTTGAA CAACCTTCTC AATGGAGGCC CCATATAACT GTCTGGTCAC TATGCCTAGG AGGAATAGGT AGTGAAAAAG AACTTCAGCG CAAATTGCTT GGAGAAGGCT CCTATTTTGC TGATTGGATT TCAAGCTGTT GTTTAGATCC CACGGGCTCC ATTAGTGCAG AAACTGGTAT TTCCCATTTA GGAAGTCAAT GTCGTACCGA AAATGGTCTA CAAAGCTTTG TTAGTGACAA TAGACAGTGC GTGTCATCGT CCATGGTTAT TTCTGAGAAC TTGTATGTCC CATATGCTGT TGTCTGTGGT TTCTTTAGTG GTGAGATAGA AATTGCAAAG TTTGATTTTC TTCATGGACT TGATTCTCCT GCTTCAAGCC CTAGATCAGA CACTGATTCA CTCGTCTCTA GACAGCGTCT TTTGGGACAT ACAGGATCTG TTATATGCTT AGCAGCACAT CGAATGTTTG GGGATGCAAA TGGATGTAGT TCTTCTCATG TTTTGATCTC CGGAAGTATA GACTGTACCA TCCGCATTTG GGATCTCGAA AGTGGAAATG TAATCATGAT CATGCATCAT CATGTTGCTC CGGTGCGCCA GATCATTCTA GCCCCAGCTC GAACAGAACG CCCATGGAGC AATTGCTTTC TATCTGTTGG GGATGATTCA TGTGTTGCTC TTTCTTCTCT TGAGACTTTG CGTGTTGAAA GGATGTTTCC TGGGCACCCA AACTATCCTA CAAAAGTCGT ATGGGATGGT ACAAGAGGCT ACATTGCATG TCTTTTCCGC TCCCTTTCGA GAAAATCAGA TCCAATTGAT GTCTTGTACA TTTGGGATGT GAAGACAGGT GCTCGGGAAC GTGTCCTCAA TGGGGCAGCT TCACATTCGA TGTTTGATCA TTTCTGTGCA GGCATTAGTG AGAAATCTTA TTCTGGCACT GTGTTAAATG GAAATACGTC AGTTTCTTCT TTGCTTTTCC CAGTAGACGA AGAGAGGAAA CCATTTTATT TGAAGAACTA TGAGCGAGCA GCCTCTTTGT CAACATCTAA GCCAAGTGCT TCGCAGGAAA AGGCTAGAGA AGAGAGTTCT ATTGCTTCGT CTTTTCTCCA AAGCATCAGA TACCCTCCCA TCAAATGCAC TTGCCCATTC CCTGGAATAT CTACTCTGAT TTTCGATCTT TCGTCTTTAG CAGTTTCTTG TCAAACACAT GAAGACTCTG ATATGCATAA GATGCTAGAA GAGAAGAGTG ATAAGCCAAC TGCTCAGCAG AAGACTTCAA ATGACAAGTC TCCTGTCCAG AAGACTCTAG ATAACCCTGC AGAAGTTGTT CACATGGACA AGGCAATTGG GGAATATCTA ATTCGATTTA GTTTATCCTT TCTGCATTTG TGGGGTATAG ATTCTGAACT CGATCAAATG CTAGTAGCAC ATCTAAAGCT AAAAAGACCA GAGAGTTTTA TTGTAACCTC CGGTTTGCAG GGGGACAAAG GGTCATTGAC ATTAGCATTC CCGGGTTTGA ATGCAACACT TGAGCTCTGG AAATCATCTT CGGAGTTTTC TGCGTTGAGG TCAGTGATGA TGGTGTCGCT TGCTCAATGC ATGATAAGTC TGTCACATTC CACTGCCACA TATAGCAGCA ACTTGGCAGC ATTCTACACA CGAAATCTGG CTGAGAAATA TCCAGATCTG AAGCCACCAT TACTCCAGCT TTTGGTAACT TTCTGGCAAG ATAAAAGCGA ACAAGTCCGT ATGGCTGCTC GGTCATTATT CCACCACACT GCATCTTTGG CAATACCTCT TCCATTATGC AGTGATCACG CATCTGAACA CACAAAACTG GTGAGATCCC TGTCTGGAAT CAGTCTGAAC GAACCTAAAG TTCTTAGCAC AGTGGAAGAA CATCCCACAA ACAGTGTGGA CTCTGAGCAT ATCCATCAAG CTCAACGGCT TTCTCAGGCT GAGGAGTCAG AACTACTCTC CTGGCTTGAA TCTTTTGAAA TGCAAGACTG GATTTCTTGC GTTGGGGGAA CAAGTCAGGA TGCAATGGCA GCTCACATCA TTGTTGCGGC TGCCTTATCA GTCTGGTACC CAAGTCTAGT AAAACCTGGT CTAGCCATGC TAGTCGTCCA CAAATTGTTG AACCTTGTTA TGGCCATGAG TGAGAAATAC AGCTCGACTG CTGCGGAGCT TCTCTCAGAA GGAATGGAGA CTACATGGAA AACATGGATC GGACCTGACA TTCCTCGGAT AGTTTCAGAC ATATTTTTCC AAATAGAGTG TGTCAGTTCC TCAGTCGGAG CACATCAAGC TGTACCATCG TCTATAAAGG AGACTCTGGT CGAAATTCTT CTTCCAAGTT TAGCCATGGC GGATGTCCTT GGATTTCTTA GCATAATAGA GAGCCAAATA TGGTCTACAG CTTCTGATTC TCCTGTTCAT GTAGTATCTC TCAGAACTCT CATCAGAATA ATCCGTGCTG CTCCAAGAAA TCTGGTACTG CATCTTGAGA AGGTAGTTAA TTTTGTTCTT CAAACAATGG ACCCAAGCAA CACCGTCATG CGTAAAACTT GCCTGCAAAC CTCAATGGCT ACACTGAGAG AAGTTGTGCG TGTATTTCCA ATGGTAATCC TAAACGATTC ATCAACAAGG TTAGCAATCG GTGATGCTAT CACAGAGATC AACAATGCAT GTATTCGCAT ATATGACATG CAAAGTATGA CAAAAATAAA GGTTTTAGAT GCGAGTGGCC CTCCGGGTCT ACCAAATTTT CTCAGAGCTT CGGAATCTGC AGTAACAACA GCTATATCAG CTCTCAGCTT TTCACCTGAT GGAGAGGGAT TGGTTGCGTT TTCAGAAAAC GGTTTGATGA TCAGATGGTG GTCACTAGGA TCGGTTTGGT GGGAGAAACT AAGCCGAAGT CTCACACCTG TTCAATGCAC AAAACTGATA TTTATTCATC CATGGGATGG ATTTTCATCA AACTCTTCAC GAACAAGTGT GATCTCAAGT ATCACAAGCG ACGAACAAGA ACTTCCTCTT CAGGAAACCG CAAAGAACAT AAGCCACGTA GAGCGGCTAA AGCAGCTTGT TCAGCATCTT GATCTCTCTT ATCGCCTCGA ATGGGCTAGT GAACGCAAAG TAGTTCTAAC TAGACACAGT GTTGAGTTGG GCACTTGCCT GTTGTGACAG CCAGTGTAAG AATTCAG |
| Length | 4447 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 19861551.. 19866684 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G11270.1 |
| Description | Transducin/WD40 repeat-like superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg922436 | RING/FYVE/PHD zinc finger superfamily protein |
| 3.16228 |
Ahg474285 | protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform |
| 3.87298 |
Ahg477288 | Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein |
| 10.0995 |
Ahg495818 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| 12.4097 |
Ahg493628 | |
| 13.8564 |
Ahg470350 | RING 1B |
| 14.4222 |
Ahg933994 | IQ-domain 9 |
| 14.8324 |
Ahg893776 | protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases |
| 15.2315 |
Ahg943674 | transducin family protein / WD-40 repeat family protein |
| 15.3297 |
Ahg493865 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|