| Annotation |
|---|
| Description | jgi|Araly1|943350|scaffold_603894.1 |
| Sequence |
CGCCGGAGAA AAAAAAAAAA ATGGAAGACC CGTTGATTGG TAGAGATAGT CGTGGTGGTG GTGCGGATCG GGTTCGTCGA TCAGAAGCTA TCACGCATGG TACTCCGTTT CAGAAAGCTG CTGCACTCGT TGATCTGGCT GAAGATGGTA TTGGTCTTCC TGAGCAAATA CTTGATCAGT CGAGTTTCGG GGAGTCTGCT AAGTATTACT TCATCTTCAC ACGCTTTGAT CTGATCTGGT CACTCAACTA TTTCGCTCTG CTTTTCCTTA ACTTTTTTGA GCAACCACTG TGGTGTGAAA AAAACCCTAC ACCGTCTTGC AAAGACAGAG ATTACTATTA CCTGGGAGAG TTACCGTACT TGACCAATGC AGAATCCATT ATCTATGAGG TGATTACCCT GGCTATACTC CTTGTACATA CTTTCTTCCC AATATCCTAT GAAGGGTCCC GAATCTTTTG GACAAGTCGC CTGAATCTAG TGAAGGTTGC TTGCGTGGTG ATTTTGTTTG TTGATGTGCT GCTTGACTTT CTATATCTGT CTCCACTGGC TTACGATTTT CTTCCTTTTA GAATCGCCCC ATACGTGAGA GTTATCATAT TCATCCTCAG CATAAGGGAA CTTCGAGACA CCCTTGTCCT TCTGTCTGGA ATGCTTGTCA CATACTTGAA TATAGTGGCT CTATGGATGT TGTTCCTTCT ATTTGCCAGT TGGATTGCTT TTGTTATGTT TGAGGATACA CAGCAGGGCC TCACGATCTT CACTTCTTAC GGTGTAACTC TTTATCAGAT GTTTATTCTG TTCACAACAT CCAACAATCC TGATGTCTGG ATTCCTGCAT ACAAGTCTTC TCGCTGGTCT TCGGTGTTCT TCGTGCTCTA CGTGCTAATT GGGGTCTACT TTGTCACGAA CTTGATTCTT GCCGTTGTTT ATGACAGTTT CAAAGAACAG CTCGCAAAGC AAGTATCTGG AATGGATCAA ATGAAGAGAA GAATGCTGGA GAAAGCCTTT GGTCTTATAG ACTCAGACAA AAATGGGGAG ATTGATAAGA ACCAATGCAT TAAGCTCTTT GAACAGTTGA CTAATTACAG GACTTTGCCG AAGATATCAA AAGAAGAATT CGGATTGATA TTTGATGAGC TTGACGACAC TCGTGACTTT AAGATAAACA AGGATGAGTT TGCTGACCTC TGCCAGGCCA TTGCTCTAAG ATTCCAAAAG GAGGAAGTAC CATCTCTCTT TGAAAATTTT CCGCAAATTT ACCATTCGGC CTTATCACAA CAACTGAGAG CCTTTGTTCG AAGCCCCAAC TTTGGCTACG CTATTTCTTT CATCCTCGTT CTCAATTTCA TTGCTGTCGT TGTAGAAACA ACGCTTGATA TCGAAGAAAG CTCGGCTCAG AAGCCATGGC AGGTTGCCGA GTTTGTCTTT GGTTGGATAT ATGTCTTGGA GATGGCTCTG AAGATCTATT CATATGGATT TGAGAATTAT TGGAGGGAGG GTTCAAACCG ATTTGACTTT CTAGTCACAT GGGTCATAGT TATTGGGGAA ACGGCTACCT TCATAACTCC AGACGAGAAC ACTTTCTTCT CAAACGGAGA ATGGATCCGG TACCTTCTCC TTGCAAGAAT GTTGAGACTG ATAAGGCTTC TTCTGCACGT CCAGCGATAC CGAGCATTTA TTGCAACGTT CATAACTCTT ATTCCAAGTT TGATGCCATA TTTAGGGACC ATTTTCTGCG TGCTGTGTAT CTACTGCTCT ATTGGCGTAC AGGTCTTTGG TGGGCTTGTG AATGCTGGGA ATAAGCAGCT CTTCAAAACC GAATTGGCTG AGGATGACTA TCTATTGTTC AACTTCAATG ACTACCCCAA TGGAATGGTC ACACTCTTCA ATCTGCTAGT TATGGGTAAC TGGCAAGTAT GGATGGAGAG CTACAAAGAT TTGACGGGGA CATGGTGGAG CATTACGTAT TTCGTCAGTT TCTACGTCAT CACTATTTTA CTTCTGTTGA ATTTGGTTGT TGCTTTTGTC TTGGAGGCGT TCTTTGCTGA GCTGGATCTC GAGGAAGAAG AAAATTGTCA AGGGGAGGAT TCTCAAGAAA GAAGAAACCG ACGTCGATCT GCAGGGACAA AGTCTAGGAG TCAGAGAGTT GATACACTTC TTCATCACAT GTTGGGTGAT GAACTCAGCA AACCAGAGTG CTCCACTTCT GACACATAAA AGAAAAAGGA TCGTTAAAA |
| Length | 2239 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 21653990.. 21659509 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G03560.1 |
| Description | two-pore channel 1 |
| TAIR curator summary | Encodes a depolarization-activated Ca(2+) channel. Anti-sense experiments with this gene as well as Sucrose-H(+) symporters and complementation of yeast sucrose uptake mutant cch1 suggest that this protein mediates a voltage-activated Ca(2+ )influx. Mutants lack detectable SV channel activity suggesting TPC1 is essential component of the SV channel. Patch clamp analysis of loss of function mutation indicates TPC1 does not affect Ca2+ signaling in response to abiotic and biotic stress. |
| Alias | [ATCCH1][ATTPC1][FOU2][TPC1][TPC1][CALCIUM CHANNEL 1][two-pore channel 1][FATTY ACID OXYGENATION UPREGULATED 2] |
| Gene coexpression |
|---|
| MR |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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