| Annotation |
|---|
| Description | jgi|Araly1|481966|fgenesh2_kg.4__1026__AT2G30520.1 |
| Sequence |
ATCTCCTTCA ATACATAACC AAAAAAAATG GCGACAGAAG GAAAAAACCC CATCAACATG AACACTATGT CTTCGAGTCT TGCAAGAACC GGTCAATGGG TTTTTTCTCA AGATATTCCG ACGGATGTTA TAGTTGAAGT CGGAGAAGCC AATTTCTCTC TTCATAAGTT CATGTTAGTG GCGAAGAGCA ACTACATAAG GAAGCTAATA ATGGAATCCA AAGACAGCGA CGTGACGAGA ATCGATCTCT CAGATATCCC CGGAGGTCCT GAGATATTTG AGAAAGCTGC CAAGTTCTGT TACGGTGTTA ACTTCGAGAT CACCGTTCAG AACGTGGCGG CTCTTCATTG CGCCGCAGAG TTTCTTCAGA TGACCGACAA GTACTGCGAC AACAACCTTG CTGGTCGGAC ACAAGACTTC CTTTCACAGG TGGCTCTCTC TAGCCTCTCT GGAGCCATTG TCGTCCTCAA GTCTTGCGAG ATTCTCCTTC CTATTTCTCG TGATCTTGGA CTTGTACGCC GTTGCGTCGA TGTCGTTGGT GCTAAGGCTT GCAACGAGGC AATGTTTCCA TGTCGAACAC CACCAAACTG GTGGACAGAG GAGCTTTGTA TCTTAGACGT CGACTTCTTC GCCGACGTTG TATCTTCCAT GAAGCAGAGA GGAGTCAAAC CTTCTTCCTT AGCCTCTGCA ATCATCACCT ACACTGAGAA ATCCTTAAGA GATCTCGTCA GAGACCATTC CGGCAGAGGA GTCAAGTTTT CCGATCCCGG AGATAACGAT TCCGACGAAA GATCGCAACA GAGAGATCTT GTTCAATCTA TCGTCTCTCT TTTACCTTCA GACAAAGGAC TTTTCCCCAT CAATTTCCTC TGTTCTCTTC TCCGTTGTGC TGTCTTCTTG GACACTTCCT TGACCTGCAA GAATGAGCTC GAGAAGCGAA TCTCGGTCGT TCTCGAACAC GTCTCTGTCG ACGATCTTTT GATCCCGTCT TTCACCTATG ACGGCGAACG GTTACTAGAT CTCGATAGTG TCAGAAGAAT CATCTCTGCT TTCGTTGAAA AAGAGAAAAA CGTCGGTGTT TTCAATGGCG GAGACTTCAA CAGAGGAGTC TGCTCTGTTT CGCTTCAAAG AGTAGCTAAA ACCGTTGATT CTTATTTAGC GGAGATAGCT ACTTACGGAG AGCTAACGAT CTCAAAATTC AACGCGATAG CTAATCTTGT TCCGAAATCC GCTAGAAAAT CAGACGACGA TCTCTACAGA GCGATAGACA TCTTCTTGAA AGCTCATCCG AATCTAGACG AGATCGAAAG AGAGAAAGTA TGTAGCTCAA TGGATCCTTT AAAGCTTTCT TACGACGCAC GTCTCCACGC TTCACAGAAC AAGAGATTAC CGGTGAACAT CGTTCTTCAC GCTCTTTACT ACGATCAGTT AAAGCTAAGA AGCGGAGTCG AAGAACAAGA AGAAAGAGCA GTAGTTGTTC TCCCTGAAGC TTTAAAGACA CGTAGCCAGC TTCAAGCTGA TACTACGTTA GCTAAAGAAA ACGAAGCGTT GAGAAGTGAG CTGATGAAGA TGAAGATGTA TGTTTCGGAT ATGCAGAAGA ATAAGAATGG CGCAGGAGCT TCTTCTTCGA ATTCGTCGTC GTTGGTGAGT ACTAAGAAGA ACAAACATAC TTTCTTCTCT TCTGTTTCAA AGAAACTTGG GAAGTTAAAT CCGTTTAAAA ATGGGTCTAA GGATACTTCG AACATAGATG AAGATCTTGC AGGTGTTGAT ATTACTAAAC CAAGGAGACG AAGATTCTCA ATCTCATGAA GAAAATGTTT GATCATTAGT GTGTGTGGGC TTTTGTGTAT AACTCCTTTA GACTAGTGTG CTTTTTTTAT TTGATGCGTG ATTTTTTTTG GGGTGTGTGT GTTTATTGTT TAATGAGATT GGATAATAAA |
| Length | 1940 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 13542315.. 13545262 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G30520.1 |
| Description | Phototropic-responsive NPH3 family protein |
| TAIR curator summary | light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis |
| Alias | [RPT2][ROOT PHOTOTROPISM 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg941394 | beta-amylase 3 |
| 1.41421 |
Ahg924442 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| 2.64575 |
Ahg476649 | J-domain protein required for chloroplast accumulation response 1 |
| 3 |
Ahg927296 | D-mannose binding lectin protein with Apple-like carbohydrate-binding domain |
| 5.65685 |
Ahg946507 | RING/U-box superfamily protein |
| 7.68115 |
Ahg496445 | hipl2 protein precursor |
| 8.77496 |
Ahg903471 | |
| 9.38083 |
Ahg494575 | GOLDEN2-like 2 |
| 10.583 |
Ahg327803 | ACT-like protein tyrosine kinase family protein |
| 10.9545 |
Ahg920472 | Inorganic H pyrophosphatase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|