Detail



ID : Ahg943589

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943589|scaffold_604133.1
Sequence
GATCTGTTTC TGTATCAAAA AAATGGTGAA AGATCTGATT GGGTATAGAT TTAGTCCGAC GGGAGAGGAA TTGATTAACC ATTACCTGAA GAACAAAAAT CTGGGTACAA AAACTTTGCT CGTTGATGAA GCCATTAGCG AGATCAACAT CTTGAGCCAC AAACCCAGCA AGGATTTGCC TAAGTTAGCT AAGATCCAAT CGGAAGATCT TGAATGGTAC TTCTTCTCTC TGATTGAGTA CACGAACCGG AAGAAGAATG AAATGAAGAG GACTACAGGT ACTGGGTTTT GGAAACCTAC TGGTGTTGAT CGGAAAATTA GGGATAAAAG AGGAAATGGT GTTGTGATCG GTTTTAAGAA GACGCTTGTG TACCATGAAG GTAAGGGTCC TAATGGAGTT AGAACTCCTT GGGCTATGCA CGAGTATCAC ATCACTTGCT TGCCTCATGA TAAGAGGAAA TATGTTATCT GCCAAGTAAA GTATAAGGGT AAAGCTGCAG ACATTTCATA TGAGCCAAGT CGCTCCGATT CGAATACTAC CAGAGCGATT AACAGAGCGG CTGAGCCTGA GCTTCAGGTT GAGCAGCCAG GTAGAGAAAA TTTCTTGGGT ATGTCTTTAG ATGATTTGGA ACAAGAGGAT CCAAAAACTT GCTTGCAGCC ACAAGGTCCT CACTTAGCCT TGAATGATGA TGAGTTTATC CGTGGATTGA GGCATGTTGA TCGAGAACAA GTTGAATATT TGTTCGCCAA TGAAGAAAAC ATTGATGGTT TGTCTATGAA TGACTTGAGA ATCCCAATGA TCGTCCAACA AGAGGATCTC TCTGAGTGGG ATGGATTTAA TGCAGACACG TTTTTCAGCG ACAACAACAA TAACAACAAC CTTAACGTGC ATCAACTAAC GCGTTACGGA GATGATTATC GGAATGCAGG TTATAACGGA GGGAATTTTG AAGGCGTGCA TCCCTATCAA GAATTAATAA TGCAAGAGAA CCGCAACGAT CACATGCCAA AGAAACCTTT GACAGGGACC ATTGATTATA GCAGCGATAG TGGCAGTGAT GCTGGATCGA TATCTACAAC GAGTTACCAA GGAATATCAA GTCCAAATAT TAGTGTTGGT AGTTCAAGCA GACGCTTGTC AAGTTGCTCA AGCACAGACT CTTGCAAAGA TCTACAAACT TCTGCAGATC CTTCAATCAG TAGAGAGACC CGGGAATATC AACTCACACA ACGCACTGTA CCATCAAAAC AAGAGGTGAA ACAAGAGATT CCAAGAGCTG TTGATGCATC CATGAACAAT GAGTCGTCTT TGGTGAAAAC AGAGGAGAAG TGCTTGTTTA TTCTAGAGGA CGCAATGGAG AGAAACCGCA AGACACCACG GTTTATCTAT CTCATGATCA TAGGCTTCAT TCGTCGTATC GGTTTTACTA CCCGTCAAAG ATTGAACCCG CTGAAGAAGT TTTGATCACG AGAGCAGATC AAATAT 
Length1486
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22739869.. 22741975
Download Sequence
A.thaliana
AGI-codeAT4G01540.1
DescriptionNAC with transmembrane motif1
TAIR curator summaryEncodes a membrane-bound NAC (for NAM, ATAF1/2, CUC2) transcription factor, designated NTM1 (for NAC with transmembrane motif1). NTM1 regulates cell division in Arabidopsis.
Alias[ANAC068][NTM1][Arabidopsis NAC domain containing protein 68][NAC with transmembrane motif1]
Gene coexpression
MR
MR Locus Description
17 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
23.622 Ahg470764 highly ABA-induced PP2C gene 2
24 Ahg488679
30 Ahg939877 Duplicated homeodomain-like superfamily protein
37.55 Ahg919779 branched-chain amino acid transaminase 2
42.0476 Ahg489474 Major facilitator superfamily protein
44.0454 Ahg473661 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
44.4972 Ahg478478 protein phosphatase 2CA
44.5982 Ahg475836 Rubber elongation factor protein (REF)
46.5833 Ahg943129 Copper amine oxidase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression