| Annotation |
|---|
| Description | jgi|Araly1|943830|scaffold_700059.1 |
| Sequence |
TTTTTAAGAG ATTTCGATCA GAATGAGCGG AGACAACGGT GGTGGTGAGA GGCGCAAAGG CTCCGTCAAG TGGTTTGACA CCCAGAAGGG TTTCGGCTTC ATCACTCCTG ACGACGGTGG CGACGATCTC TTCGTTCACC AGTCCTCCAT CAGATCTGAG GGTTTCCGAA GCCTAGCTGC CGATGAGGCT GTCGAGTTCG AGGTTGAGAT GGACAACAAC AGCCGTCCCA AGGCCATCGA TGTGTCTGGA CCCGACGGCG CTCCCGTCCA AGGAAACAGC GGTGGTTCAT CTGGCGGACG TGGCGGTTTC GGTGGCGGAA GAGGTGGTGG CCGCGGATCT GGAGGTGGAT ATGGCGGTGG TGGTGGATAC GGAGGAAGAG GAGGTGGCCG AGGAGGCAAC GACTGCTACA AGTGTGGTGA GCCCGGTCAC ATGGCGAGAG ACTGTTCTGA CGGCGGTGGA GGTTACGGAG GAGGCGGTGG TGGTTACGGA GGAGGCGGAG GCAACTACGG CGGAGGAGGC GGCCGCGGAG GAGGCGGAGG CGGGGGAAGC TGCTACAGCT GTGGCGAGTC GGGACATTTC GCCAGGGATT GCACCAGCGG TGGACGTTGA AACAAACGCC GGTCCGGTGG |
| Length | 630 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 191883.. 192491 |
| Download Sequence |
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| A.thaliana |
|---|
| AGI-code | AT4G38680.1 |
| Description | glycine rich protein 2 |
| TAIR curator summary | Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development. |
| Alias | [ATCSP2][CSDP2][CSP2][GRP2][ARABIDOPSIS THALIANA COLD SHOCK PROTEIN 2][COLD SHOCK DOMAIN PROTEIN 2][COLD SHOCK PROTEIN 2][glycine rich protein 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg470078 | SEC7-like guanine nucleotide exchange family protein |
| 1.41421 |
Ahg477938 | dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative |
| 4.24264 |
Ahg943858 | vacuolar-type H(+)-ATPase C3 |
| 8.77496 |
Ahg931398 | |
| 9.16515 |
Ahg486522 | 3'-5'-exoribonuclease family protein |
| 10.7703 |
Ahg928793 | Cytochrome b-c1 complex, subunit 8 protein |
| 11.4018 |
Ahg481704 | ABC-2 type transporter family protein |
| 12.3288 |
Ahg482810 | acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit |
| 13.2665 |
Ahg925842 | |
| 14.1421 |
Ahg913492 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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