Detail



ID : Ahg486522

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486522|fgenesh2_kg.5__2514__AT3G60500.2
Sequence
ACCAAGCTTA CTCTGAATCG CCGCCGTGTT ACATGTACTG TTGTTAAGGC CGAGAGATAG ATAAAAAAAA ATATTTGTCC GATTTCGCCG CCGCTCCCTA AAATCTTTGG AGCTCCTTCT TATTTAGCCG GAGGTGAAAA GAAGGAAGAA AGTCCAAGTG TCTCTTCTCA TCTCTTTTCT CCAATAGTTA CTAGTCATAG CAGAATAATG GAGGGGAGAT TGGCTAATAT GTGGAGGTTG ACTGTGAACG AGAGTAAATT CGTGGAAACT GCGTTGCAAT CTGAACTCAG AGTTGATGGT CGTGGCCTTT ATGATTACCG CAAGCTTACT ATTAAGTTTG GCAAAGAATA TGGTAGCTCG GAAGTTCAAC TTGGTCAGAC TCATGTAATG GGTTTTGTGA CTGCTCAGAT GGTACAACCT TACAAAGACA GACCTAATGA AGGTTCTCTA TCTATCTTCA CGGAATTTTC TCCAATGGCT GATCCGTCTT TTGAGCCTGG TCGTCCTGGC GAATCTGCTG TGGAGTTGGG ACGCATTATC GACCGTGGTC TAAGAGAAAG CCGTGCGGTA GATACAGAGT CACTCTGCGT TCTAGCTGGA AAGATGGTTT GGTCTGTTCG TATTGATCTT CATGTCTTGG ACAACGGAGG GAACTTGGTT GATGCTGCAA ATATTGCTGC TTTAGCAGCT CTCATGACGT TTAGGAGACC CGACTGCACT GTAGGAGGAG AGAACGGTCA AGAAGTGATC ATACATCCAC CAGAGGAAAG GGAACCACTT CCATTGATAA TACATCATCT CCCAATAGCC TTCACGTTTG GATTTTTTAA TAAAGGCAAC ATTGTGGTGA TGGACCCAAC TTATGTTGAA GAAGCAGTTA TGTGTGGGAG AATGACTGTG ACAGTTAATG CCAATGGCGA TATATGTGCA ATCCAAAAAC CGGGGGAAGA AGGCGTGAAC CAGAGTGTAA TTCTTCATTG CCTGCGTCTT GCTTCTTCAC GAGCTGCTGC AACAACAAAG ATCATTAGAG AAGAAGTTGA AGCATATAAC CGTGAGAGAA GCTTACAGAA GGTGAAGCGA CATCCCACTT TGGCTAAATC TGAAGTTTCT GGACCTACTG TAGCTGTGAA GGAGGAATAT AGGAAGTCCT CAGATCAGGA AAAATCTGCA GAGATATCTC GGGAACATGT TGAAAGACTA AAGCTCTCTC CAGAGGAACT AAGAAGCAGT AAGGAACAAG AAGCTGCCAA TTTTAAAGGC GGTCCCTCAA ATTGGGACCC TTACTCAGAA GCTATGGATG TTGATTCACT GAAAGTTTCT CTTGCTTCAA AAGCGGATTC CATTACTAAG TCATCGAGCA AGAAGAAAAT GAATGGCTCT GGAAATGCGC AGAAGGATGA CGGTGAGATT TCAGCTGAGG AAGTAACCGG AGATTTAGGG AAGAAGGATA CAAAACACAA GGATGGAGAG ATGACACTTA AAGATGCTGT CAAACCTAAA AAGAAGCGGA AAAACAAAAG CTGAGTTAAT GCATTTTCCC GATCACTCTT TTACTTTCTT CTTCCCTTGA AACTCAAGAC TAGAGACGGT TTTAGGTCAA TTGTATCTGA AAAGTCAAGA GTTTTGTTTC ATAAGATGAG 
Length1640
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18805549.. 18808219
Download Sequence
A.thaliana
AGI-codeAT3G60500.1
Description3'-5'-exoribonuclease family protein
TAIR curator summaryEncodes a 3'-5' exoribonuclease, positively regulates CER3 transcription, involved in cuticular wax biosynthesis.
Alias[CER7][G3][ECERIFERUM 7]
Gene coexpression
MR
MR Locus Description
9 Ahg889026 Cytosol aminopeptidase family protein
9.16515 Ahg475472 alpha-1 tubulin
9.16515 Ahg943830 glycine rich protein 2
11.3578 Ahg488148 ARF GTPase-activating protein
12.4499 Ahg484445 Glycosyl hydrolase family 38 protein
15.9374 Ahg489475 TCP-1/cpn60 chaperonin family protein
17.7482 Ahg915958 Eukaryotic aspartyl protease family protein
18.1384 Ahg477535 RING/FYVE/PHD zinc finger superfamily protein
28.9828 Ahg893724
29.8664 Ahg471469 ARM repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression