Detail



ID : Ahg943848

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943848|scaffold_700077.1
Sequence
CAGGACAAGA TAACAAAAAG ATGGCTTTTT TGAGGAGTTT CTTGGGTGCT AAGCAAATTA TGCGAAGGGA ATCATCGTCG ACACCAAGAG GATTCATGGC GGTGTATGTA GGAGAGAATG ATCAGAAGAA GAAGAGATAT GTGGTGCCGG TTTCATACTT AAACCAGCCT CTGTTTCAAG AACTGTTGAG TAAATCCGAG GAAGAGTTTG GTTATGATCA TCCTATGGGC GGCTTAACCA TACCATGTCA TGAATCTTTG TTCTTCACAG TCACATCTCA GATTCGATGA AGTAGTACAA CAACATTTCC 
Length310
Protein Sequence
Protein Residue
Map Locationscaffold_7: 249098.. 249407
Download Sequence
A.thaliana
AGI-codeAT4G38850.1
DescriptionSAUR-like auxin-responsive protein family
TAIR curator summarymRNA is rapidly induced by auxin and is very short-lived. Has been used as a reporter gene in studying auxin mutants.
Alias[ATSAUR15][SAUR-AC1][SAUR15][SAUR_AC1][ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15][ARABIDOPSIS COLUMBIA SAUR GENE 1][SMALL AUXIN UPREGULATED 15][SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg946744 Thioredoxin superfamily protein
18.9473 Ahg938032 PIF1 helicase
21.6333 Virus1870
27.7128 Ahg932046 SAUR-like auxin-responsive protein family
28.1425 Ahg315086 Calcium-dependent lipid-binding (CaLB domain) family protein
40.398 Ahg495355
42.5441 Ahg946057 RNI-like superfamily protein
50.9902 Virus0780
58.1464 Ahg478619 Leucine-rich repeat (LRR) family protein
60.075 Ahg906154
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression