Detail



ID : Ahg943964

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943964|scaffold_700193.1
Sequence
AGCAGCTCTC ATAAGCTAAG ATGTCGTCAT CGCCTTTTCC AGTCTTGGAC AACCGACCAA TTGATAAGTG GAAGGTTACA GAATTGAAAG AAGAGCTTAA AAGACGGAGA CTAACAACAA GAGGCTTGAA GGAGGAATTG GTTAGGCGTC TTGATGAAGC ACTTCGTGTT GAGCAAGAAG AGTCTGAAAG AATCAACAGT GCTGCTGCTG AGAAAGCCAA TCAAGAGGCT CATATGTTTC CTGTTACTGG AGGCGACGTC AATGTTACAC CAGATCGTAA TCAAACCACT CCTGTTACTC CTGTTGAAGC AGCATTTAGC ACTGAGACAA CTCCTGTTGC AGCTGAGAAA ACCCCAGAAC CAATTCAGGC TAAGACAACA ACTGAAGCTT CAGCTGGTGT TGAAACAACA CCAACCCCAG TATTTTCAAA ACCAGAGGTT AACCCGGTGC CATTCGCTAG TGATGAAGTT GAGAAAGTTG ATGATGTTAG AGACATAGCT GGTCTTGATA GTTCAGTGGT TGCATGTGAT GCAGCAGTTG TGGACGTGGC CTCTAGTGAG CACAAATCTG AGAATAAGGA ACCATTTAGT GGGTTGGATG GTGGGGATTC TAAGGCTCAA CCATCAGAGG CAGTGCTTGA AAAATCTGCT ATGAACAACC AGGTATCTGA GGTCATCCCC ATTACAGGGT TTGAGGTAAA ATCTGATTGT ATTTCTACTG ATTCTGTGTC AAATAATGAA AAAATAGAAC TAAAGGATAA CAAAATTGCT GATAATGTCA AATTAGAACA AAATGTTAAT AAGTTCCAAG AGCCATCAAC AGTCGTTGGC GAATCGCATC CAATGGATGT CGAGGAGCCA CTTGAGCAGA AGAAATCTGT TGGAGGTGGA GATGACAGCA ATGCTGCAAA TGCAGATATG ACCAAAGAAA ATAATATTAT CGATGCAGGC GACTCAGAAA AGTTGAATTT AGATAGAAGT TCTGGTGATG AGTCTATGGA GGATGAGCCA GAGACAAAGC AAACTGAGTC AATTACATCT GTTGATAAGA GTGAGAAAAT TGAAACCCTT TCTAAGGAGG AAAGCCGTGC TGATAGGGAT GCTGGGAAAG GGAAAGCCCC TGAAAATAAA AGTCATCCAC TGGTGGCTTC TGACAAAAGA AAGCTTCCTG CTAATGATCA AGAAGCTGTT GGAAACAATG AGCCTGCAAA GAGGCAACGC CGATGGAACT CTGAAAGTAT TAAAGTTCCT GAAGCACAGA CCACGAATAG TGCTACACCC ACTACAACAC CAAGGTCGAC CGGTCTGAAG CGCGACTTCT CAAGATCTGA CTCTTCGGTT AGTGAGGATG GACCCAAGGA ACGCGTGGTT CCTCCATCTC CAAAGGAGCC TACAAATTCC CTCAGGATTG ATCGTTTCCT AAGGCCGTTC ACACTGAAAG CTGTTCAGGA ACTCCTGGGT AAAACCGGAA ACGTCACTAG TTTCTGGATG GACCACATTA AGACCCATTG CTATGTATCA TATCCCTCTG TTGAAGAAGC TGCAGCAACA AGAGAAGCAG TGTATAACCT CCAATGGCCA CCTAATGGAG GCCGCCATCT GATAGCTGAA TTTGTCAGAC CAGAAGAAGT AAAAGCAAAA CTGGAAGCTC CTCTACCTCC TCCTCCTCAG CCTCAGCATC AGCATCAGCC ACAAGCTCAG ACTCTTTCGC GGCCACCTCC AACCGCTCTT CCACCACCAC CACCTCTGGC CAAACCACCT CCTGTCGTAG AACGTCTTCC TCTTCCTCCC CCTCCTCCTC TAGTCTCTGA GGAGCAAGAA CCTCCCATTG TCACTCTTGA TGATCTTTTC AAGAAGACAA AAGCAATCCC CAGGATATAT TACTTACCCT TGTCAGAGGA GCAAGTTGCA GCTAAACTTG CAGCTAATAA TAACAAGTGA TCTTGCTGGT TTGTGGGCAT 
Length1960
Protein Sequence
Protein Residue
Map Locationscaffold_7: 653453.. 655885
Download Sequence
A.thaliana
AGI-codeAT4G39680.1
DescriptionSAP domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg497034 kinesin-like calmodulin-binding protein (ZWICHEL)
1.73205 Ahg492104 Galactosyltransferase family protein
5.65685 Ahg344116 chromatin remodeling factor CHD3 (PICKLE)
6.63325 Ahg942264 Threonyl-tRNA synthetase
8.3666 Ahg472710 cullin 3
8.77496 Ahg484543 golgin candidate 6
11.6619 Ahg482652 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
12.49 Ahg484728 O-fucosyltransferase family protein
14.9666 Ahg491589 Coatomer, beta subunit
15.8745 Ahg472693 glycine-rich protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression