Detail



ID : Ahg944436

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944436|scaffold_700665.1
Sequence
ACCTCAGTTT CCAAGCAGAA ATGACGGTGA AGATAAGGCT GGCGCGTTTT GGTTGTAAAC ATCGACCCTT CTATCGTGTA GTTGCCGCCG ATGACAAATC GCGGAGGGAC GGTAAACAAA TCGAGGTTTT AGGGTTTTAT GATCCACTCC AAGGGAAAGA AGATGCGAAT AGAGTGAGCC TCAAATTCGA CAGAATCAAG TACTGGTTAT CTGTTGGAGC TCAACCAACA GACTCAGTGG AAAATATGCT GTTCAGGGCC GGTTTGATAC CCCCAAAGTC TATGGTAGTG GTTGGTTCGA AAAATGGGCA GCAATCTACA AGCCAACATG TTTCACCCAT TACAGGTGAA ATCTTGAACT AGGAGTGTTG ATGCGCTGAG CAAG 
Length384
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2522841.. 2524049
Download Sequence
A.thaliana
AGI-codeAT4G34620.1
Descriptionsmall subunit ribosomal protein 16
TAIR curator summaryEncodes ribosomal protein S16, has embryo-defective lethal mutant phenotype
Alias[SSR16][small subunit ribosomal protein 16]
Gene coexpression
MR
MR Locus Description
6.16441 Ahg495335 RNA binding Plectin/S10 domain-containing protein
8.66025 Ahg928005
16.7929 Ahg494257 Hyaluronan / mRNA binding family
17.2627 Ahg488300 Isocitrate/isopropylmalate dehydrogenase family protein
22.0227 Ahg940287 serine carboxypeptidase-like 35
22.5389 Ahg485312 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
24.4131 Ahg939059 Zinc-binding ribosomal protein family protein
25.7682 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
26.3059 Ahg487557 Mitochondrial substrate carrier family protein
26.6083 Ahg486818
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression