Detail



ID : Ahg940287

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940287|scaffold_600831.1
Sequence
GAGAAGAGAA AGCGTTTGGC GATGAAGAAG AACGCACTTT GGCTACTGTG CATTCTGGTG TTACCGGCGA TAGCCTGTGG TAGGCAACCG GGGAAGAAGG TAACAGTTTC ATCCTCTGGG AGGAAAGAAG ATGACCTGGT AACCGGTTTG CCCGGCCAAC CACCGGTTAA CTTTAAACAC TACGCCGGTT ACGTGAATCT GGGGCCTGAA CAGAAGCAGA AGGCACTTTT CTATTGGTTC TTCGAAGCCC AACAAAACTC TTCTCGTCGT CCTCTCGTCC TTTGGCTCAA TGGAGGACCG GGTTGCTCAT CAATAGCCTA TGGAGCTGCA CAAGAACTAG GCCCTTTTCT TGTTCACACC AACGGTGACA AACTTACCTA CAATAATTTC TCCTGGAACA AAGAGGCCAA TATGTTGTTC TTGGAAGCAC CGGTTGGGGT TGGGTTCTCG TATACCAATA ACTCAATGGA TCTTCAAAAG CTTGGAGATG AAGTTACCGC AGCGGACTCT CTTGCTTTCT TGATCAACTG GTTCATGAAA TTCCCCGAGT TCCGATCCAA CGAGTTTTAC ATCTCCGGAG AGAGTTACGC CGGTCACTAT GTTCCTCAGC TTGCGGAGGT AATTTACGAC AGGAACAAGA AGACAAAAGA CTCTCGCATT AATCTCAAGG GTTTCATGAT AGGGAATGCG GTGATCAATG AGGCAACAGA CATGGCAGGA CTAGTGGACT ACGCATGGAG CCACGCTATA ATATCGGACG AGGTCCACAC CAACATCCAT GGCTCGTGCC GTTTTGAGGA AGATACCACC AACAAGACCG AACAATGCTA CAACAATTTC AAAGGGTTCA TGGATGCTTA CAACGATATC GATATATACA GCATCTACAC TCCCGTTTGC CTCTCCTCTT TGTCCTCATC TTCTCCAAGT AAACCTAAAA TTGTCGTGTC TCCTCGTCTC CTTACTTTTG ACGACATGTG GGTCAAGTTT CCGGCCGGGT ACGATCCATG CACTGAAGGT TATGCCGAAA ATTATTTTAA CCGGAAAGAT GTGCAGGTTG CACTCCATGC GAATGTCACA AACCTTCCTT ATCCGTACTC TCCTTGCAGC GGAGTAATAA AGAGATGGAA TGATGCTCCA TCCACCATGA TTCCCACCAT ACAAAAGCTT TCAACGGGCG GCCTCCGCAT CTGGATCTAT AGCGGAGATA CGGACGGGAG AGTTCCGGTA ACATCTACAC GCTATAGCAT AAAAAAGATG GGACTTAAGG TTGAGTTACC GTGGAGGTCA TGGTTCCACA AGAGTCAAGT GGCTGGATGG GTTGAGACTT ATGCCGGAGG ACTAACGTTT GTCACGGTGA GAGGAGCCGG TCACCAGGTT CCGTCCTTTG CTCCGGCGCA ATCTCTCACA TTATTCTCTC ACTTCCTTTC TTCAGTGCCC TTGCCTTCAA AACGGTTCTG ATCAGTACCG TCAAGTCATG AT 
Length1482
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3108108.. 3112453
Download Sequence
A.thaliana
AGI-codeAT5G08260.1
Descriptionserine carboxypeptidase-like 35
TAIR curator summary
Alias[scpl35][serine carboxypeptidase-like 35]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg488334 Gibberellin-regulated family protein
3.4641 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
3.4641 Ahg942855 Ribosomal protein L6 family
4.12311 Ahg488410 reversibly glycosylated polypeptide 2
5.2915 Ahg477458 reversibly glycosylated polypeptide 1
5.47723 Ahg939059 Zinc-binding ribosomal protein family protein
5.47723 Ahg480962 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
6.32456 Ahg944923 Low temperature and salt responsive protein family
6.48074 Ahg929366 Phototropic-responsive NPH3 family protein
7.28011 Ahg319696 Aluminium activated malate transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression