Detail



ID : Ahg944631

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944631|scaffold_700860.1
Sequence
AGAACGAGCA CTTGCTAATC ATGGACGAAG CAGGTAGGAT GAGGAGGCAT GATGAAACCA TGACACTCAT AAAGAATTAC CTTGAGCAAC ACGGAATGTC CAGCACGGTT CAAGCGAACA ACACAATACC TACTGTTGAT GTAGAGAATC AAAGGGAAAG AGTGGTTCAG TATGTGAAGA GCCTAATCGA ACAAGACCTA AATGTTAGGT CCATGTTCTA TCCAACAGTC ATTGAGGGAC AAAGTAGACT ACAAACCCTC TTAGAACAGA GCGTGAACTG GCAACATAGA GATTGCGTTC ATAGCCCCTT GTTTGCTTCT TTGCTCAATG ATCACCACTG TACTCCCCAA CCCCTTCATC AGAATCATCA AACTCTAGCC ACCAACAATT TGGATATGCA GGCATCATCA TCAGGATTAG GAAACTATGA CCCGATGTTA CTTGAGTTCA ATGGCCAACC CCAACACTCA GCTGGTTCCC ATTACTCACC GTCATTATAT TTGACTATTG AAGATGATAC AGTCATGCCT GGATGGACTA TTAACTCAGA TCAGTCAGCG GGTTTTTCAA ACGACATTCC ATCTGTTGTT ACTGTTCCGC CGACCTTTTC TCTGTCCGAT AGCGTTGTGA AAGATATTCA TGTGACTGAG GTTGTCACTG CTTTTGAGTT TCACCATCAT CTCCCTTTGG TACTTGCTGT GGGTTTCTCT GAAGGTTTAG TTCACACTTA CAACTATATA CATGAACAGC GCCCTAAGCC ACACCTTGAG ATTGAGGCAC ATAGTGGGCC TGTCAATGAT ATCGTGTTCT ATAGTTCTCA AGGAGAGCTA AAGATAGTAA CCTGTGGAAA TGACAGACAC ATTAAGGCTT GGAATTCATC AAATGGGTTA GTGTACTGGA AATTGACTCA TACAGCTCCC TTAAATTCTC TTGCTTTGCA CCAAGATGGA AACAAAGTGC AACTCTTTAT CTTGGATGTG TTTGGAACTG CTATGAAACC AAACATAGGA TATAACGGAC CACTTGATAG TAATCCACTT CTTTTCCCTA GTGATATGAA TGCTAGGCTT GAACTCAAGT TTAGCGGCGA TGGAAAGAGA TTGTTCTGTT ATGGTCCGGG TGGCTTGGTT GAGGTTGATA GAGAATCTTT TGAGACTAGG AGAAATTACA ACAGCGTTAT GAATCCTCAA ACAAAATGCA TGGATATTTG CAAGAATGGG TATATAGCTG TTGGCGATGA ATATTGTGTG AAAGTCTGGA ATGTGGACAG TGATCATCTT TTCAGAAAGA TCAAGATAGA CGCAGCAGTA TTTCCGGAAT GTCCCATGGT TAAGTTTAAC AGGGAAGGCT CTTTGTTAGC CGTGGTGAGC TCATTATGGA GAAGATGGAC AATTAAACTT GCAAAAAACA TCTCAAGTGC TGTATTTTAC ATCAGACTAG GCTGGGAAAA CGTCTGCTCC GTTAATGGGC TAAGTGAAGG AGAGTTATGT AAGTTTAAAC TTTTCCAAAA TGGGGAAAGA CCTGTGCTTT GGCTGTGTCC AGGGGAACCT GGCATTGGCC ACAAACAGAA GAGGACGTTG GATGAAGTTT CCAAGGGAAA GGAGAAGAAT ACACCTAGCC GTGAAAGTAC CGGGCAACTA TCACTTCCAA TGAGTTTCAC GAGGAAGAAT AACATTAATA AGGCTGGGGA GGTAATTCTG CTGAACCAAG ATGGAAGAAA GTGGTCATCT TATCTACAGA TAACAGGACT TGGACGAGCC GGAAGTGAAT GGTTTTATTT GAGAAGAGGT TGGAGAGAGA TGTGCGAAGC GAATGGAGTG AAGGGAAAAG GAAACCAAAG CACTCGTAAG AAGAGAGCTT GTGAGACTGC TCCTCAGCCA AAGAATGTGA AAAAGGCTCC AAGAGTAGGA GTAGAGGGAC GGCTGAATAA GAGAATAAGT TGCTGACCAG AGCATCAAGT TGATGA 
Length1966
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3230601.. 3235452
Download Sequence
A.thaliana
AGI-codeAT4G31610.1
DescriptionTranscriptional factor B3 family protein
TAIR curator summaryExpressed specifically in reproductive meristems, member of a moderately sized gene family distantly related to known plant DNA binding proteins
Alias[ATREM1][REM1][REPRODUCTIVE MERISTEM 1]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg947031
3.74166 Virus1737
4.47214 Virus1076
4.89898 Ahg923562 Membrane trafficking VPS53 family protein
4.89898 Virus1448
5.65685 Ahg938456 Plant self-incompatibility protein S1 family
8.3666 Ahg949959
8.48528 Ahg334861 ATP binding;GTP binding;nucleotide binding;nucleoside-triphosphatases
13.4164 Ahg493457 SMAD/FHA domain-containing protein
15.5563 Ahg950573
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression