Detail



ID : Ahg945247

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945247|scaffold_701476.1
Sequence
TGAATTTTTA TAAGAAAGAG AATGATAATC AAACGGAAAT TTAAAACCCA GATACCGAGT TTGAACCACT CGGGCAATGA GTCCAGAAAG AAGAGAAAGT CGAACTTGGG AGGTTGTTAC TATCCTCTCA ATCTTCTCGG AGAAATCGCC GCCGGGATTG TTCCAGGAAA TGGACGGAAT GGATTCTCTG CTTCCTGGTG CAATGAAGTT TCCTGTTCGG TGAAACCTGT TGAGGTTGAA GAGTTGATTT CTAAGAGAAG ATCCGATTCC GGCGTTGTGA GGGATCCTCC TCCGGCTGAA GTCTCACGCC CACCGCTTGT TCGGACATCT AGGGGACGAA TTCAGGTGCT TCCTTCTCGA TTCAATGATT CGGTGCTCGA TAATTGGAGG AAAGATAGCA AAAGTGATTG TGATTTGGAG GAAGAAATAG AATGCAGGGA TGATAAAGTT GTTAGTTTTC GGGTTCCTAA AGCTAGTAAT TTGAAAAGCA AGGAACTTGA TAGGAACAGT AAGTATAGTG CATTGTGTAA AGAAGCAAGG TTTCACGAGC AACGTAATGA GGCTCGTGCT CGTGTTGATG AGAAGCTTCC AAATAAACAA GGTACTTTTG GGCCTGAGAA CTTCTATTCA GGTGACTTGG TTTGGGCAAA GTCTGGGAGA AATGAGCCGT TTTGGCCTGC CATTGTTATC GATCCAATGA CACAAGCACC CGAGCTTGTT TTGCGTTCTT GTATACCCGA TGCTGCCTGT GTTGTGTTCT TTGGTCACTC TGGGAACGAG AATGAAAGGG ACTACGCATG GGTGAGGAGA GGGATGATCT TCCCTTTTGT GGATTATGTT GCCAGGTTCC AGGAACAGTC TGAACTGCAA GGTTGCAAGC CTGGGAATTT TCAGATGGCA TTGGAGGAAG CATTTTTGGC AGATCAGGGA TTCACGGAGA AGTTGATGCA TGATATTCAC TTGGCTGCTG GTAACCCGAC TTTTGACGAT TCTTTCTACA GATGGATTCA AGAAACTGCG GTCTCAAAGC AGGATCTCAA TAACAATGCT CCAACCCAGG GGCTGTTAAA GAAACACAGA AATCCACTAG CATGTGCAGG ATGTGAAACG GTCATTTCTT TTGAGATGGC AAAAAAAATG AAAGCTCTGA TTCCTGGAGA TCAGTTGTTG TGTAAACCAT GTTCAAGGTT AACAAAATCA AAACACATTT GTGGTATATG CAAGAAGATA AGGAATCATT TGGACAGTCA AAGCTGGGTG CGCTGTGATG GTTGTAAAGT CTGGATACAC GCAGAGTGTG ACCAAATATC AGATAAGCAT TTGAAGGATT TGGGGGAAAC AGATTACTAC TGTCCTACTT GCAGAGCTAA ATTTAACTTT GACCTATCAG ATTCAGAAAA ACAAAACACA AAGTCAAAAC TTGGCAAAGG CGATGGTCAG ATGGTTCTTC CTGACAAGGT TATTGTTGTA TGCGCTGGAG TAGAAGGAGT TTATTTTCCG AGGCTCCATT TAGTGGTATG TAAGTGTGGC TCCTGTGGAC CCAAAAAGAA AGCCCTTAGC GAATGGGAAA GACATACCGG ATCAAAGTCA AAAAATTGGA AGACCAGTGT GAAAGTCAAA AGCTCTAAGC TGGCACTAGA AGATTGGATG ATGAAATTAG CAGAGTTACA TGCAAATGCT ACTGCAGCTA AAGTGCCTAA ACGACCTTCC ATAAAGCAGA GAAAGCAGAG ATTGCTTGCT TTTCTATCAG AGACATATGA GCCGGTCAAT GCGAAGTGGA CAACAGAACG ATGTGCAGTT TGCAGATGGG TTGAAGATTG GGACTACAAC AAGATTATTA TCTGCAACAG ATGCCAAATA GCAGTGCATC AGGAATGCTA TGACGCTAGA CATGTGCGTG ATTTCACCTC ATGGGTCTGT AAAGCATGTG AGAGACCAGA TATTAAGCGG GAGTGTTGCC TCTGCCCTGT AAAAGGAGGT GCATTGAAGC CAACTGATGT GGAAACGTTG TGGGTTCATG TGACATGTGC TTGGTTTCAG CCTGAAGTAT GTTTTGCAAG TGAGGAAAAA ATGGAACCTG CAGTTGGGAT TTTGAGTATT CCATCAACTA ATTTTGTGAA GATATGTGTA ATATGCAAAC AAATACATGG CTCGTGTACT CAGTGTTGCA AGTGTTCTAC ATACTATCAT GCCATGTGTG CCTCCCGAGC TGGTTATAGA ATGGAGTTGC ACTGCTTGGA GAAAAATGGT CAGCAGATTA CAAAGATGGT GTCCTATTGT GCTTATCATA GGGCTCCAAA CCCAGATAAC GTGTTAATTA TACAAACTCC TTCAGGGGCA TTCTCTGCAA AGAGTCTTGT CCAAAACAAG AAGAAAGGTG GTTCCAGGCT TATTTCATCA ATTAGAGAAG ACAATGAAGA GTCACCTGCA GAGGATACCA TTACACGTGA TCCATTTTCT GCTGCTCGTT GTCGAGTATT TAAAAGAAAG ATCAATAGCA AGAAGAGGAT TGAAGAAGAA GCCATTCCTC ACCACACAAG GGGACCACGC CATCATCCAT CAGCAGCAAT CCAAACTCTA AACACATTCA GACATGTGCC GGAAGAACCA AAATCGTTTT CTTCTTTCAG GGAACGACTT CACCACTTGC AGAGGACAGA AATGGATCGG GTCTGCTTTG GGCGATCTGG AATACATGGA TGGGGTCTTT TCGCAAGAAG AAATATCCAA GAAGGAGAAA TGGTTCTTGA ATACAGAGGG GAACAGGTGA GAGGCAGCAT TGCAGACTTG AGAGAAGCAC GGTATCGCAG AGTAGGGAAG GATTGCTATC TTTTCAAGAT CAGTGAAGAA GTAGTGGTTG ATGCTACAGA TAAAGGGAAT ATAGCTCGGC TCATCAACCA TTCGTGTACG CCAAATTGCT ATGCGAGGAT TATGAGTGTG GGAGATGAGG AAAGCAGGAT TGTCCTGATA GCCAAGGCCA ATGTAGCTGT GGGAGAGGAG TTAACGTATG ATTACTTATT TGATCCAGAC GAGGCAGAGG AACTCAAGGT GCCATGCCTA TGTAAAGCCC CCAACTGCAG GAAATTCATG AATTAGAATA GAAAACCTTA TTGTAGGGTC T 
Length3121
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5571195.. 5576740
Download Sequence
A.thaliana
AGI-codeAT4G27910.1
DescriptionSET domain protein 16
TAIR curator summary
Alias[ATX4][SDG16][SET domain protein 16]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg492627 SWIB complex BAF60b domain-containing protein
7.07107 Ahg473199 O-acetyltransferase family protein
11.6619 Ahg477648 evolutionarily conserved C-terminal region 1
12.1244 Ahg335256 ATP binding microtubule motor family protein
13.2665 Ahg892739 nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases
13.3041 Ahg474828
14.0712 Ahg945696 Protein kinase superfamily protein
15.2315 Ahg483517 inositol 1,3,4-trisphosphate 5/6-kinase 4
18.3303 Ahg491406 Peptidyl-tRNA hydrolase II (PTH2) family protein
20.199 Ahg930058 purin 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression