Detail



ID : Ahg945393

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945393|scaffold_701622.1
Sequence
TGTGAATGGT AAAACAGTGA GAGATGTCTG GGTTCGTGGG TGTTGTCCTT TCGGATCCAT GGCTACAGAG CCAGTTCACT CAAGTCGAAC TTCGGACTCT CAATTCCAAG TATGTGTCTA TGAAGAATCA GAGTGGAAAG ATCACTATTG AATATCTCCC TCCTCTATTG GCAAAGCTCA AGGCACTTAG TGCAACATTT AAGGAGGATG AAATCAAGGG GATACTAGGG GAAGTGGGTT CTGATACAAG CACTGATGTG AGTTTTGAAG AGTTTCTCAA GATATATCTC AACTTACTAA GTAAAGCAGC TGAGAAATCT GGTGGTCATA AGAACTCATC CTCGTTTCTT AAATCTTGTA CAACGACACT TCTTCACACT ATATATCAGT CGGAGAAGGG TTCTTTTGTT CAGCACATCA ATAGATATCT TAAGGATGAC CCCTTTTTGA AGCAGTTCCT TCCTCTTGAC CCTCATTCTA ATGAATTGTA TGAACTTGTG AAAGATGGTG TACTTCTTTG TAAGCTTATA AATGTAGCAG TTCCTGGGAC AATAGATGAA CGAGCGATCA ACACGAAGAG GGTACTTAAT CCGTGGGAGA GAAATGAGAA TCACACGCTT TGTCTAAACT CTGCTAAAGC TATTGGATGC TCTGTTGTTA ATATTGGGAC ACAGGACCTT GCCGAAGGAC GGCCTCACCT GGTGCTTGGA TTGATTTCAC AACTCATAAA GATTCAACTA CTTGCTGATC TCAATTTAAA GAAGACGCCT CAGCTTGTTG AGCTGCTTGA GGACAGCGAT GATGTCGAGG AGTTGCTGAG ATTACCCCCT GAGAAAGTCT TACTGAAATG GATGAACTTC CATCTTAAGA AAGGGGGTTA CAAGAAAACT GTCTCAAACT TTTCCGCAGA TTTGAAGGAT GCACAAGCCT ATGCCTTTCT GCTCAATGTT CTCGCACCTG AACACTGTGA CCCGGCTACA CTAGATGCAA AGGATCCTCT TGAAAGGGCT GAACTGGTTC TCAGTCATGC AGAGAGAATG AACTGCAAGC GATACTTGAC TGCAGAAGAG ATCGTTGAAG GATCTCCAAC TTTGAATCTT GCCTTTGTGG CACAAATATT CCATGAAAGG AATGGTCTAA ATACCGATGG TAAGTATTCA TTTGCGGAGA TGATGACCGA AGATGTACAG ACTTGTAGAG AGGAACGATG CTACCGGCTA TGGATCAACA GCCTGGGGAT TGACATTTAT GTCAATAATG TATTTGAAGA TGTTAGAAAT GGATGGATTC TTCTTGAAGT TCTTGACAAG ATCTCTCCCG GTTCAGTCAA CTGGAAGCAT GCTTCCAAAC CGCCAATTAA GATGCCGTTT AGAAAAGTAG AGAACTGCAA TCAAGTCGTA AAGATCGGGA AACAGCTAAA ATTCTCACTT GTGAATGTAG CTGGAAATGA TATAGTTCAA GGGAATAAGA AACTCATTCT TGGTCTCTTA TGGCAGTTGA TGAGATTCCA TATGCTCCAA CTTCTCAAGA GTCTCCGATC TCGGACACAA GGTAAAGAGA TGACTGATGC GGATATCCTC AGCTGGGCCA ACAGGAAAGT ACGAACCATG GGGCGAAAAT TGCAAATCGA GAGTTTCAAG GACAAGAGTC TATCGAGCGG GGTATTCTTC CTCAACCTTT TATGGGCGGT TGAGCCAAGA GTTGTAAACT GGAATCTTGT CACCAAGGGT GAAACAGATG ATGAGAAAAG GTTGAATGCT ACATACATAG TTAGCGTCGC AAGAAAGCTC GGTTGTTCGG TTTTCTTGTT GCCTGAAGAT ATTGTGGAGG TGAATCAGAA GATGATTTTA ATCTTAACGG CAAGTATAAT GTACTGGAGT CTTCAGAGAC ATTCACCGGA GAGTTCTGAT TCGTCGTCAA CTCAGAGCAC CACAACGACG TGCACCAGCA CAGCCGCGTC CCCTGCTCTA TCTGTCACAG AAGAGGAGGA AGTCTCCTCA TTGAGGAGTG AAGTCTCGTG CTTGGCCATT GATGATAACG ATGCAGATGC GGTTTCAGAC ATCACCACTG TCTCAGAGGA AGCAGCCATC GAATAGAGAG AGCGAGATAT ATCATA 
Length2116
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6068917.. 6072698
Download Sequence
A.thaliana
AGI-codeAT4G26700.1
Descriptionfimbrin 1
TAIR curator summaryfimbrin-like protein
Alias[ATFIM1][FIM1][ARABIDOPSIS THALIANA FIMBRIN 1][fimbrin 1]
Gene coexpression
MR
MR Locus Description
6.16441 Ahg335585 RNA-binding CRS1 / YhbY (CRM) domain-containing protein
8.48528 Ahg946375 glycine-rich cell wall protein-related
9.11043 Ahg943195 fibrillin
9.48683 Ahg493171 ureidoglycine aminohydrolase
9.53939 Ahg920718 Endosomal targeting BRO1-like domain-containing protein
10.3923 Ahg482098 UDP-glucosyl transferase 74D1
10.4881 Ahg477407 RNA-binding (RRM/RBD/RNP motifs) family protein
11.225 Ahg944698 2Fe-2S ferredoxin-like superfamily protein
11.9164 Ahg492313 mitochondrion-localized small heat shock protein 23.6
12.8452 Ahg930190 ascorbate peroxidase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression