| Annotation |
|---|
| Description | jgi|Araly1|335585|fgenesh1_pg.C_scaffold_1002150 |
| Sequence |
ATGGCGATTG TAGCATCACT ACGAGACATT AATCTCTTCT CTTCACTCCC TTCAACACCT CCAATGGCGG ATTCATCATC AGGAACTTTC CGGCCAGCTC CGCCGATACC GATTCCGAAA TACTCACCAT CTAATAGAAA TCGTAATCGG AAAACTAATC ATCAAATTCA AACCGATACA CAGCCGAAGA AACCACAATC AAATCCGGCT CTCAAGCTTC CGCATCACCG AACCAGATAC TACAAACCGG TTAAGGAAGG AGTTATCTCT TCAGACGGCG ACCGCACAAT CGTAATTGGC GAATCCGGTG TCTCGTATCA GCTTCCCGGC GCGCCGTTCG AGTTTCAGTT CAGTTACTCT GAGACACCGA AAGCTAAACC GGTTGGGATT CGTGAACCGG CGTTTATGCC GTTTGCGCCA CCGACGATGC CGAGACCGTG GACTGGGAAA GCACCGTTGA AGAAATCAAA GAAGAAGATT CCGTTGTTTG ATTCATTCAA TCCACCACCG GCGGGAAAAT CTGGAGTTAA GTATGTAGAA ATGCCTGGGC CGTTGCCGTT TGGGAGGTAT CCAAAGGAAG GAATGAATAG AGAAGAGATT TTAGGAGAGC CATTGAAGAA ATGGGAGAAA GGAATGTTGA TTAAGCCTCA TATGCATGAT AATCGTCAGG TTAATTTGGG AAGAGATGGA TTTACACATA ATATGTTGGA ATTGATACAT TCGCATTGGA AGAGACGACG TATTTGTAAA GTTCGATGTA AAGGAGTTCC TACTGTGGAT ATGGATAACG TGTGTCGTGT TCTTGAGGAA AAGACAGGAG GAGAGATTAT TCACAGAGTT GGAGGTGTGG TGTACCTCTT CAGGGGTAGA AATTACAATT ATCGCACACG TCCGCAATAC CCGTTGATGT TGTGGAAGCC AGCAGCTCCT GTTTATCCAA AGCTCATTCA AGAAGTTCCT GAAGGATTGA CGAAAGAGGA AGCTCATGAG TTCAGGGTGA AGGGCAAGTC TCTTAGACCC ATTTGCAAGT TGTCTAAAAA TGGGGTCTAC GTGTCACTAG TCAAGGATGT TAGGGATGCC TTTGAACTGA GTCCCTTGGT GAAAGTCGAC TGCCCAGGAC TTGAACCAAG TGATTATAAG AAAATAGGCG CTAAACTTAA GGAGTTAGTT CCATGTGTGC TTCTGTCTTT CGATGATGAG CAAATACTCA TGTGGAGGGG ACGAGATTGG AAGTCGCGGT TTGTAGACAA TCCTTTAATT CCAAGCCTTT CTGAAACCAA CATAGCGAAC GAACTTGATC CCTCAGACAA ACCCAGTGAC GAACAAACTG TGTCTGATCC AAGTTCAACG ATCTCAAGCC CCAAAATGAT CTCGCTCTGG AAACGAGCAT TGGAATCGTC CAAGGCGGTG ATTCTTGAAG AGCTTGACCT TGGTCCGGAC GATCTATTGA AGAAGGTGGA AGAGTTAGAA GGCACTTCAC TGGCTGCAGA ACACACTTAC ACAGCTATGG TCTTGTCGAA TACTGATGGT GCAGCAGAGG ATTACGTGGA TGACAAGGAC CGGTCCGAAG AGTATAGTGA CATAGACGAT GACTTTGATG ACGAGTGTTC CGATGATGAG TCGCTAGATC CGGTTGGTCC AGTGGGAACT TTGCCCGTTG ACAAGATAGT TAGGAAGCTG AGGGAGAGAC TAAAATAG |
| Length | 1698 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 9896293.. 9898990 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G23400.1 |
| Description | RNA-binding CRS1 / YhbY (CRM) domain-containing protein |
| TAIR curator summary | Promotes the splicing of chloroplast group II introns. |
| Alias | [ATCAF2][CAF2][ARABIDOPSIS THALIANA HOMOLOG OF MAIZE CAF2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.09902 |
Ahg940275 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 6.16441 |
Ahg945393 | fimbrin 1 |
| 14.8324 |
Ahg476213 | phosphoglucomutase, putative / glucose phosphomutase, putative |
| 18.735 |
Ahg946342 | Pentatricopeptide repeat (PPR) superfamily protein |
| 19.2873 |
Ahg921459 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| 24.3721 |
Ahg328390 | Eukaryotic aspartyl protease family protein |
| 30.4959 |
Ahg476834 | NagB/RpiA/CoA transferase-like superfamily protein |
| 31.9844 |
Ahg950808 | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase |
| 33.4664 |
Ahg480662 | |
| 34.5977 |
Ahg495834 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|